RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 TMEM79Q9BSE2 394 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 WDR26Q9H7D7 661 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 C11orf16Q9NQ32 467 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 PHPT1Q9NRX4 125 aaPredicted RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 OPTCQ9UBM4 332 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 CIDEBQ9UHD4 219 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 FIS1Q9Y3D6 152 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 ASB1Q9Y576 335 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 TRIOO75962 3097 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 GOLGA8QA0A0J9YX86 632 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 GOLGA8OA6NCC3 632 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 MGAT4DA6NG13 374 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 E9PBE3 544 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 GOLGA8NF8WBI6 632 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 K7EPI3 171 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 ZSCAN9O15535 394 aaPredicted RBP16.49■□□□□ 0.23
COPS3-212ENST00000539941 KLHL41O60662 606 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 OTCP00480 354 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 CATP04040 527 aaKnown RBP16.49■□□□□ 0.23
COPS3-212ENST00000539941 NCF2P19878 526 aaPredicted RBP16.49■□□□□ 0.23
COPS3-212ENST00000539941 HSPA7P48741 367 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 PRKCQQ04759 706 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 FGL2Q14314 439 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 TMEM92Q6UXU6 159 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 LRRC70Q7Z2Q7 622 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 SYVN1Q86TM6 617 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 ZNF547Q8IVP9 402 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 FBXO15Q8NCQ5 510 aaPredicted RBP16.49■□□□□ 0.23
COPS3-212ENST00000539941 ESAMQ96AP7 390 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 C19orf60Q96EN9 201 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 DPEP2Q9H4A9 486 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 DCLRE1BQ9H816 532 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 GULP1Q9UBP9 304 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 DNAJC15Q9Y5T4 150 aa16.49■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3DA0A087WVF3 549 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3IA0A087WXS9 549 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3EA0A087X179 549 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3KA0A087X1G2 549 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 MAGEA13PA6NCF6 341 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3FA6NER0 549 aaPredicted RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 PRR5-ARHGAP8B1AHC4 643 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3LB9A6J9 549 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 H3BM21 787 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 VPS4BO75351 444 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 STK16O75716 305 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 POP7O75817 140 aaKnown RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 PAK4O96013 591 aaPredicted RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 CHEK2O96017 543 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3HP0C7X1 549 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 ESRRAP11474 423 aaPredicted RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 NDUFV2P19404 249 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 MAP4P27816 1152 aaKnown RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 PRDX6P30041 224 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 ARHGAP8P85298 464 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 RPA4Q13156 261 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 UBAP2LQ14157 1087 aaKnown RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 KPNB1Q14974 876 aaKnown RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3GQ6DHY5 549 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 NXNQ6DKJ4 435 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 OR52E8Q6IFG1 317 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3CQ6IPX1 549 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 KIAA1324Q6UXG2 1013 aaKnown RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 TREML1Q86YW5 311 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 TBC1D3Q8IZP1 549 aaPredicted RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 CPSF7Q8N684 471 aaKnown RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 TWIST2Q8WVJ9 160 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 NOL11Q9H8H0 719 aaKnown RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 MBNL1Q9NR56 388 aaKnown RBP16.48■□□□□ 0.23
COPS3-212ENST00000539941 TAGLN3Q9UI15 199 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 ANGPTL3Q9Y5C1 460 aa16.48■□□□□ 0.23
COPS3-212ENST00000539941 TCRBV21S2A2A0A5A6 115 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 CCNT2O60583 730 aaKnown RBP16.47■□□□□ 0.23
COPS3-212ENST00000539941 KATNA1O75449 491 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 ENO1P06733 434 aaKnown RBP16.47■□□□□ 0.23
COPS3-212ENST00000539941 MYCLP1P12525 358 aaPredicted RBP16.47■□□□□ 0.23
COPS3-212ENST00000539941 PTPN4P29074 926 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 PBLDP30039 288 aaPredicted RBP16.47■□□□□ 0.23
COPS3-212ENST00000539941 PREPP48147 710 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 INPP5AQ14642 412 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 C18orf21Q32NC0 220 aaPredicted RBP16.47■□□□□ 0.23
COPS3-212ENST00000539941 C11orf96Q7Z7L8 435 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 LRRTM4Q86VH4 590 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 TRIM69Q86WT6 500 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 CFAP206Q8IYR0 622 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 OXR1Q8N573 874 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 DENND6BQ8NEG7 585 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 ATL1Q8WXF7 558 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 NCSTNQ92542 709 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 FBXL8Q96CD0 374 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 SLC7A6OSQ96CW6 309 aaPredicted RBP16.47■□□□□ 0.23
COPS3-212ENST00000539941 PPP1R36Q96LQ0 422 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 LRFN3Q9BTN0 628 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 OSBPL6Q9BZF3 934 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 SLC32A1Q9H598 525 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 ZNF385DQ9H6B1 395 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 IPPKQ9H8X2 491 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 POLMQ9NP87 494 aaPredicted RBP16.47■□□□□ 0.23
COPS3-212ENST00000539941 ZNF225Q9UK10 706 aa16.47■□□□□ 0.23
COPS3-212ENST00000539941 NDRG2Q9UN36 371 aaKnown RBP16.47■□□□□ 0.23
COPS3-212ENST00000539941 TMEM98Q9Y2Y6 226 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms