RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 NR1H4Q96RI1 486 aaPredicted RBP19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 TRIM54Q9BYV2 358 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 COPS7BQ9H9Q2 264 aaPredicted RBP19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 HEBP1Q9NRV9 189 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 FAM234BA2RU67 622 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 CCDC154A6NI56 674 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 FADS2P1A8MWK0 482 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 KPNA5O15131 536 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 STK16O75716 305 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 C8GP07360 202 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 ELFN1P0C7U0 828 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 HSPA14Q0VDF9 509 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 SMAD4Q13485 552 aaKnown RBP19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 ABRAXAS2Q15018 415 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 NUDT18Q6ZVK8 323 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 CATSPER1Q8NEC5 780 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 NTMT1Q9BV86 223 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 RIOK2Q9BVS4 552 aaKnown RBP19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 ARL15Q9NXU5 204 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 NFKBIL1Q9UBC1 381 aaPredicted RBP19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 RIMS3Q9UJD0 308 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 COQ6Q9Y2Z9 468 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 DTNAQ9Y4J8 743 aa19.8■□□□□ 0.76
PACSIN3-211ENST00000539589 FXYD1O00168 92 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 LSM1O15116 133 aaKnown RBP19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 NUAK1O60285 661 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 EEDO75530 441 aaKnown RBP19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 EGFP01133 1207 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 EBLN1P0CF75 366 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 CAMK2GQ13555 558 aaPredicted RBP19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 GBX1Q14549 363 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 PON2Q15165 354 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 SPATS1Q496A3 300 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 C6orf10Q5SRN2 563 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 PLEKHS1Q5SXH7 462 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 UBE2R2Q712K3 238 aaPredicted RBP19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 ERN2Q76MJ5 926 aaKnown RBP19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 DHFR2Q86XF0 187 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 ICA1LQ8NDH6 482 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 SKA2Q8WVK7 121 aaPredicted RBP19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 VPS33AQ96AX1 596 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 PPP3R2Q96LZ3 170 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 SLC12A9Q9BXP2 914 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 LEF1Q9UJU2 399 aaPredicted RBP19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 PDE10AQ9Y233 779 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 TRPM6Q9BX84 2022 aa19.79■□□□□ 0.76
PACSIN3-211ENST00000539589 DYTNA2CJ06 578 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 EIF4E1BA6NMX2 242 aaKnown RBP19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 NME4O00746 187 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 WDR47O94967 919 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 ASGR2P07307 311 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 MPC1LP0DKB6 136 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 DRD3P35462 400 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 P2RY2P41231 377 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 ZFP36L2P47974 494 aaKnown RBP19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 AQP4P55087 323 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 CDKL1Q00532 357 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 CNTN1Q12860 1018 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 PRKG2Q13237 762 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 NFYCQ13952 458 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 ACOX1Q15067 660 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 AP5B1Q2VPB7 878 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 RNF165Q6ZSG1 346 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 CACUL1Q86Y37 369 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 SLC15A3Q8IY34 581 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 TCAIMQ8N3R3 496 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 TRAM1L1Q8N609 369 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 COQ10AQ96MF6 247 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 HBEGFQ99075 208 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 PARVBQ9HBI1 364 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 TRPS1Q9UHF7 1281 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 AP4S1Q9Y587 144 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 MAGEA13PA6NCF6 341 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 PABPN1LA6NDY0 278 aaKnown RBP19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 RGS14O43566 566 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 AP2A2O94973 939 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 HIST1H2AGP0C0S8 130 aaPredicted RBP19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 HIST1H2ADP20671 130 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 SLC6A2P23975 617 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 CAPRIN1Q14444 709 aaKnown RBP19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 NUMA1Q14980 2115 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 KIAA1211LQ6NV74 962 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 MBOAT1Q6ZNC8 495 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 DSG4Q86SJ6 1040 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 ADCY4Q8NFM4 1077 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 PROKR1Q8TCW9 393 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 PPP1R16AQ96I34 528 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 HIST1H2AHQ96KK5 128 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 HIST1H2AJQ99878 128 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 H2AFJQ9BTM1 129 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 ZSCAN5AQ9BUG6 496 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 RSPH9Q9H1X1 276 aaPredicted RBP19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 VCXQ9H320 206 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 TRPV5Q9NQA5 729 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 PIAS3Q9Y6X2 628 aa19.78■□□□□ 0.76
PACSIN3-211ENST00000539589 TCRBV3S1A0A5B6 114 aa19.77■□□□□ 0.76
PACSIN3-211ENST00000539589 C1QTNF3-AMACRE9PGA6 284 aa19.77■□□□□ 0.76
PACSIN3-211ENST00000539589 SLC28A1O00337 649 aa19.77■□□□□ 0.76
PACSIN3-211ENST00000539589 ULK1O75385 1050 aa19.77■□□□□ 0.76
PACSIN3-211ENST00000539589 HSD17B1P14061 328 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms