RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 RFC2P35250 354 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ALDH3A2P51648 485 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 CLCN7P51798 805 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SLC13A2Q13183 592 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SH3D19Q5HYK7 790 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 BRAT1Q6PJG6 821 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 BANPQ8N9N5 519 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ING5Q8WYH8 240 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 IL12RB2Q99665 862 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 CCM2Q9BSQ5 444 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 TMED5Q9Y3A6 229 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 AGRPO00253 132 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 VNN1O95497 513 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ZBTB11O95625 1053 aaPredicted RBP6.37□□□□□ -1.39
LSAMP-207ENST00000539563 FSHRP23945 695 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SEC13P55735 322 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ADGRF1Q5T601 910 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 LRRC70Q7Z2Q7 622 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PIGWQ7Z7B1 504 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 MARK1Q9P0L2 795 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PDE10AQ9Y233 779 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PRAMEF12O95522 483 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SLC1A2P43004 574 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PDX1P52945 283 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 TMEM110Q86TL2 294 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 HID1Q8IV36 788 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 GATA5Q9BWX5 397 aaPredicted RBP6.37□□□□□ -1.39
LSAMP-207ENST00000539563 LRRC3Q9BY71 257 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 DNAJB9Q9UBS3 223 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 MGAT4AQ9UM21 535 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF879B4DU55 563 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 TACSTD2P09758 323 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 CPN2P22792 545 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 UGT1A3P35503 534 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PIK3CBP42338 1070 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 NRG3P56975 720 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SLC9B1Q4ZJI4 515 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ADNP2Q6IQ32 1131 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 POMZP3Q6PJE2 187 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 CYP2U1Q7Z449 544 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 IFNL1Q8IU54 200 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 IFNLR1Q8IU57 520 aaPredicted RBP6.37□□□□□ -1.39
LSAMP-207ENST00000539563 GORASP1Q9BQQ3 440 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SERINC1Q9NRX5 453 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 TMEM150CB9EJG8 249 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SLC31A1O15431 190 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PCDH7O60245 1069 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 VIPR1P32241 457 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ARHGAP1Q07960 439 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 RASGEF1BQ0VAM2 473 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SIRPB2Q5JXA9 342 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 EOGTQ5NDL2 527 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PPP2R2DQ66LE6 453 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 GPR65Q8IYL9 337 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 C9orf43Q8TAL5 461 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 FAR1Q8WVX9 515 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 DUSP26Q9BV47 211 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 IFT46Q9NQC8 304 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 VPS29Q9UBQ0 182 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PFDN2Q9UHV9 154 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CAPN8A6NHC0 703 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SLC7A1P30825 629 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 GNALP38405 381 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SLC18A1P54219 525 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 GHRHRQ02643 423 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 FAM174BQ3ZCQ3 159 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SPATS1Q496A3 300 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 QSOX2Q6ZRP7 698 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 USP43Q70EL4 1123 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 RAB43Q86YS6 212 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 C7orf61Q8IZ16 206 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 FITM2Q8N6M3 262 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ZIM2Q9NZV7 527 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CCDC59Q9P031 241 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 INSL6Q9Y581 213 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 LOXHD1Q8IVV2 1947 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 IQCF5A8MTL0 148 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 HCN1O60741 890 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 TRIM3O75382 744 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 METTL18O95568 372 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PGRP06401 933 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ADH5P11766 374 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 GBX2P52951 348 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 AP1S2P56377 157 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CYP4F8P98187 520 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PCDH1Q08174 1060 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 VWA5B1Q5TIE3 1220 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CLEC20AQ6ZU45 233 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 LRP10Q7Z4F1 713 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF433Q8N7K0 673 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SLC13A3Q8WWT9 602 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 C11orf49Q9H6J7 331 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CHP2O43745 196 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 COQ9O75208 318 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 NPPAP01160 153 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 RLN1P04808 185 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF3P17036 446 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ARCN1P48444 511 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 TAS2R39P59534 338 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SWI5Q1ZZU3 235 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms