RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 H2AFJQ9BTM1 129 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 GATA5Q9BWX5 397 aaPredicted RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 ERVK-6Q9BXR3 956 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 MANSC1Q9H8J5 431 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 CIDEBQ9UHD4 219 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 PTBP2Q9UKA9 531 aaKnown RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 ASB1Q9Y576 335 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 PI4KAP42356 2102 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 LRRC14BA6NHZ5 514 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 STX16-NPEPL1H3BU86 382 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 STX16O14662 325 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 KLF11O14901 512 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 S100BP04271 92 aaPredicted RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 RPN2P04844 631 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 SERPINE1P05121 402 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 MTHFD1P11586 935 aaKnown RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 NEFHP12036 1026 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 LSP1P33241 339 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 HALP42357 657 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 DPP6P42658 865 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 NAGLUP54802 743 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 GNGT1P63211 74 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 GRB7Q14451 532 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 ZXDCQ2QGD7 858 aaPredicted RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 C18orf21Q32NC0 220 aaPredicted RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 LRRC8CQ8TDW0 803 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 SREK1Q8WXA9 508 aaKnown RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 PKP4Q99569 1192 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 TMEM79Q9BSE2 394 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 TRIT1Q9H3H1 467 aaKnown RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 SPASTQ9UBP0 616 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 ARHGEF17Q96PE2 2063 aaPredicted RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 PCDH15Q96QU1 1955 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 PABPN1LA6NDY0 278 aaKnown RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 TAPBPO15533 448 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 SDC3O75056 442 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 PIAS2O75928 621 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 SLC16A8O95907 504 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 CFIP05156 583 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 ANXA5P08758 320 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 IMPDH1P20839 514 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 ARRB2P32121 409 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 BST1Q10588 318 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 GRIK2Q13002 908 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 DUOXA1Q1HG43 343 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 ZNF678Q5SXM1 525 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 SULT1C3Q6IMI6 304 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 RABEPKQ7Z6M1 372 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 TRIM42Q8IWZ5 723 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 TBC1D21Q8IYX1 336 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 PPP1R14CQ8TAE6 165 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 LMX1AQ8TE12 382 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 UBTD2Q8WUN7 234 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 ESAMQ96AP7 390 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 CCDC138Q96M89 665 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 ELF4Q99607 663 aaPredicted RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 HGH1Q9BTY7 390 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 CAPN10Q9HC96 672 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 FSCN3Q9NQT6 498 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 ZNF624Q9P2J8 865 aaPredicted RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 WDR87Q6ZQQ6 2873 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 CACNA1HO95180 2353 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 PATE3B3GLJ2 98 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 AQP9O43315 295 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 SHOX2O60902 331 aaPredicted RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 H2AFYO75367 372 aaKnown RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 RPS17P08708 135 aaKnown RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 GRK2P25098 689 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 EEF1DP29692 281 aaKnown RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 HNMTP50135 292 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 ASPHQ12797 758 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 PRKG2Q13237 762 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 SHBQ15464 509 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 IYDQ6PHW0 289 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 ZC3H14Q6PJT7 736 aaKnown RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 RPS27LQ71UM5 84 aaKnown RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 RAB44Q7Z6P3 723 aaPredicted RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 SFTPA2Q8IWL1 248 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 CCNYL1Q8N7R7 359 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 CEP76Q8TAP6 659 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 MAGEC3Q8TD91 643 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 FBXL8Q96CD0 374 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 LRFN3Q9BTN0 628 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 C1QTNF3Q9BXJ4 246 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 UCKL1Q9NWZ5 548 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 WWOXQ9NZC7 414 aa11.11□□□□□ -0.63
FAM60A-206ENST00000539409 STOX2Q9P2F5 926 aaPredicted RBP11.11□□□□□ -0.63
FAM60A-206ENST00000539409 PRAMEF33A0A0G2JMD5 474 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 TCP11X1B4DZS4 312 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 SNNO75324 88 aaPredicted RBP11.1□□□□□ -0.63
FAM60A-206ENST00000539409 EPN2O95208 641 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 IMPA1P29218 277 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 UNC50Q53HI1 259 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 ATG14Q6ZNE5 492 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 GKN2Q86XP6 184 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 NAGSQ8N159 534 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 TCAIMQ8N3R3 496 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 FAM46DQ8NEK8 389 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 OR9A1PQ8NGU1 263 aa11.1□□□□□ -0.63
FAM60A-206ENST00000539409 PATE1Q8WXA2 126 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms