RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 TRIM39Q9HCM9 518 aa19.91■□□□□ 0.78
DDX55-205ENST00000538744 ZNF490Q9ULM2 529 aaPredicted RBP19.91■□□□□ 0.78
DDX55-205ENST00000538744 CCL27Q9Y4X3 112 aa19.91■□□□□ 0.78
DDX55-205ENST00000538744 LIN7AO14910 233 aaPredicted RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 TNFRSF4P43489 277 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 UFM1P61960 85 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 CAMK2GQ13555 558 aaPredicted RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 CST6Q15828 149 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 PRMT9Q6P2P2 845 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 TRIM46Q7Z4K8 759 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 TRAPPC5Q8IUR0 188 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 LILRA3Q8N6C8 439 aaPredicted RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 NRG4Q8WWG1 115 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 ATL1Q8WXF7 558 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 USP7Q93009 1102 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 SLC52A3Q9NQ40 469 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 GID8Q9NWU2 228 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 SUCOQ9UBS9 1254 aaKnown RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 A0A1W2PP18 115 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 FAM234BA2RU67 622 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 C9JVG2 144 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 AP1G1O43747 822 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 VEGFDO43915 354 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 LILRB5O75023 590 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 BAG2O95816 211 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 ADH1BP00325 375 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 DRD3P35462 400 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 SOX9P48436 509 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 CCR3P51677 355 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 POLR2JP52435 117 aaKnown RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 MAD2L1Q13257 205 aaPredicted RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 ZNF658BQ4V348 819 aaPredicted RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 EP400NLQ6ZTU2 488 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 KBTBD6Q86V97 674 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 PYCR2Q96C36 320 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 MAGEB10Q96LZ2 347 aaPredicted RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 CCDC138Q96M89 665 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 HOPXQ9BPY8 73 aaPredicted RBP19.9■□□□□ 0.78
DDX55-205ENST00000538744 TMEM181Q9P2C4 612 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 MAP10Q9P2G4 905 aa19.9■□□□□ 0.78
DDX55-205ENST00000538744 H3BM21 787 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 MID1O15344 667 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 BCAS2O75934 225 aaPredicted RBP19.89■□□□□ 0.77
DDX55-205ENST00000538744 ZFP36L2P47974 494 aaKnown RBP19.89■□□□□ 0.77
DDX55-205ENST00000538744 GALK1P51570 392 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 IMPG1Q17R60 797 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 SAMD4BQ5PRF9 694 aaKnown RBP19.89■□□□□ 0.77
DDX55-205ENST00000538744 IL23RQ5VWK5 629 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 NEK5Q6P3R8 708 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 AADATQ8N5Z0 425 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 L3MBTL4Q8NA19 623 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 PPFIBP2Q8ND30 876 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 CSGALNACT1Q8TDX6 532 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 HIC2Q96JB3 615 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 TEX37Q96LM6 180 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 FARSBQ9NSD9 589 aaKnown RBP19.89■□□□□ 0.77
DDX55-205ENST00000538744 CLDND1Q9NY35 253 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 ATXN10Q9UBB4 475 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 SLC22A14Q9Y267 594 aa19.89■□□□□ 0.77
DDX55-205ENST00000538744 POLR3HQ9Y535 204 aaPredicted RBP19.89■□□□□ 0.77
DDX55-205ENST00000538744 DYTNA2CJ06 578 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 KRT87PA6NCN2 255 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 NVLO15381 856 aaKnown RBP19.88■□□□□ 0.77
DDX55-205ENST00000538744 SLC2A4P14672 509 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 C5AR1P21730 350 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 ITPKAP23677 461 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 PFN3P60673 137 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 RPL38P63173 70 aaKnown RBP19.88■□□□□ 0.77
DDX55-205ENST00000538744 MS4A2Q01362 244 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 FOXM1Q08050 763 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 CPSF6Q16630 551 aaKnown RBP eCLIP19.88■□□□□ 0.77
DDX55-205ENST00000538744 SGO1Q5FBB7 561 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 AGBL4Q5VU57 503 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 CYP20A1Q6UW02 462 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 ADAMTSL4Q6UY14 1074 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 MINDY1Q8N5J2 469 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 ASB9Q96DX5 294 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 LINC00615Q96LM1 132 aaPredicted RBP19.88■□□□□ 0.77
DDX55-205ENST00000538744 GPATCH1Q9BRR8 931 aaKnown RBP19.88■□□□□ 0.77
DDX55-205ENST00000538744 ATG10Q9H0Y0 220 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 ZNHIT2Q9UHR6 403 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 SNX6Q9UNH7 406 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 GPR34Q9UPC5 381 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 EIF3LQ9Y262 564 aaKnown RBP19.88■□□□□ 0.77
DDX55-205ENST00000538744 LRRC42Q9Y546 428 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 KCNE1BA0A087WTH5 132 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 CCDC154A6NI56 674 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 EEDO75530 441 aaKnown RBP19.88■□□□□ 0.77
DDX55-205ENST00000538744 PDHA2P29803 388 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 MSX2P35548 267 aaPredicted RBP19.88■□□□□ 0.77
DDX55-205ENST00000538744 GNPDA1P46926 289 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 PRKG2Q13237 762 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 MUM1Q2TAK8 710 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 RFTN2Q52LD8 501 aaPredicted RBP19.88■□□□□ 0.77
DDX55-205ENST00000538744 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.88■□□□□ 0.77
DDX55-205ENST00000538744 ZFAND4Q86XD8 727 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 CACUL1Q86Y37 369 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 KLHDC8AQ8IYD2 350 aa19.88■□□□□ 0.77
DDX55-205ENST00000538744 CFAP206Q8IYR0 622 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms