RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 A8MT66 165 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 H0YIN7 160 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 BCKDKO14874 412 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 AZIN1O14977 448 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 AIREO43918 545 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 TPST1O60507 370 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 SNX2O60749 519 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ZBTB7AO95365 584 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 PGK1P00558 417 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 GH2P01242 217 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 C1QBP02746 253 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 FTH1P02794 183 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ALPPP05187 535 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 RPLP0P05388 317 aaKnown RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 GSTM1P09488 218 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 HOXC6P09630 235 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 FAM87AP0C7U9 286 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 CD36P16671 472 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 IL7RP16871 459 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 GGT1P19440 569 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 CAPN3P20807 821 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 PTBP1P26599 531 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP28-207ENST00000538475 CSTF2P33240 577 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP28-207ENST00000538475 GGT5P36269 586 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 TGFBR2P37173 567 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 TALDO1P37837 337 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ETFBP38117 255 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 PIK3CBP42338 1070 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 MTHFRP42898 656 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 CTSKP43235 329 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ALDH9A1P49189 494 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 RGS7P49802 495 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ARHGDIAP52565 204 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 HERVK_113P63132 956 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 SCN1BQ07699 218 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ASAH1Q13510 395 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 MXD4Q14582 209 aaPredicted RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 EIF4HQ15056 248 aaKnown RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 MAPK11Q15759 364 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 CCDC85BQ15834 202 aaPredicted RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 MEP1AQ16819 746 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 CTU2Q2VPK5 515 aaKnown RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 GPAT3Q53EU6 434 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 CATSPEREQ5SY80 951 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 KANK2Q63ZY3 851 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ARHGAP17Q68EM7 881 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 LAIR2Q6ISS4 152 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 TRNP1Q6NT89 227 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 TBPL2Q6SJ96 375 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 LAYNQ6UX15 382 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ABHD15Q6UXT9 468 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 PID1Q7Z2X4 250 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 KCTD20Q7Z5Y7 419 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 SYVN1Q86TM6 617 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 VSIG10LQ86VR7 867 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 UNC93AQ86WB7 457 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 RALGPS2Q86X27 583 aaPredicted RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 PHYKPLQ8IUZ5 450 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 LURAP1LQ8IV03 231 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ZBTB8OSQ8IWT0 167 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 MICU2Q8IYU8 434 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 PARP16Q8N5Y8 322 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 TTLL6Q8N841 843 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 DNAAF3Q8N9W5 541 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 SLC43A3Q8NBI5 491 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 LINC00116Q8NCU8 138 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 OR52K1Q8NGK4 314 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 RHEBL1Q8TAI7 183 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 CLEC4DQ8WXI8 215 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 MYDGFQ969H8 173 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ELMO3Q96BJ8 720 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 MAGEB10Q96LZ2 347 aaPredicted RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 PDCD2LQ9BRP1 358 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 TARS2Q9BW92 718 aaKnown RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 NT5C1AQ9BXI3 368 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ERVK-6Q9BXR3 956 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 AMBRA1Q9C0C7 1298 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 SLC22A4Q9H015 551 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 OSBPL2Q9H1P3 480 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ASAH2Q9NR71 780 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 CHRAC1Q9NRG0 131 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 IGSF5Q9NSI5 407 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 NRBP2Q9NSY0 501 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 AIG1Q9NVV5 245 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 SLC17A6Q9P2U8 582 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 RABL2AQ9UBK7 228 aaPredicted RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 EIF3KQ9UBQ5 218 aaKnown RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 FBXO40Q9UH90 709 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 PGAP2Q9UHJ9 254 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 GLS2Q9UI32 602 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 ZBTB21Q9ULJ3 1066 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 VPS4AQ9UN37 437 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 GPR45Q9Y5Y3 372 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 SCN1AP35498 2009 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 A0A1W2PQ72 361 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 MEIOCA2RUB1 952 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 DDTLA6NHG4 134 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 TOR1BO14657 336 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PRMT5O14744 637 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 MUSKO15146 869 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms