RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MCCC1Q96RQ3 725 aaPredicted RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 WDR11Q9BZH6 1224 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 BCL2L14Q9BZR8 327 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 PIGUQ9H490 435 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ABCB8Q9NUT2 735 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ACTR10Q9NZ32 417 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 XPR1Q9UBH6 696 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KLF15Q9UIH9 416 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 SLC39A10Q9ULF5 831 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ZFR2Q9UPR6 939 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 SLC12A8A0AV02 714 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 TARM1B6A8C7 271 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ERVV-1B6SEH8 477 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 SMLR1H3BR10 107 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 SLC30A4O14863 429 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 OGTO15294 1046 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ORC5O43913 435 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 USP2O75604 605 aaPredicted RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 RECQL5O94762 991 aaPredicted RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 RHOBTB1O94844 696 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 MATN4O95460 622 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 NPPAP01160 153 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ANXA6P08133 673 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ACSM4P0C7M7 580 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 HNRNPLP14866 589 aaKnown RBP eCLIP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 GPC1P35052 558 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ZNF143P52747 638 aaPredicted RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 TBCEQ15813 527 aaPredicted RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ZACNQ401N2 412 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 FLYWCH1Q4VC44 716 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 PAN2Q504Q3 1202 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 RABL3Q5HYI8 236 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KDM4DQ6B0I6 523 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ERICH5Q6P6B1 374 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 RNF130Q86XS8 419 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KIAA0319LQ8IZA0 1049 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 GPD1LQ8N335 351 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 COQ8BQ96D53 544 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 CGRRF1Q99675 332 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 CHCHD6Q9BRQ6 235 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 TTPALQ9BTX7 342 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KATNAL1Q9BW62 490 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 DDX4Q9NQI0 724 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 MGAT4AQ9UM21 535 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 EDARQ9UNE0 448 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 TMX2Q9Y320 296 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 OAS3Q9Y6K5 1087 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 V9GYH0 126 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 CNTNAP4Q9C0A0 1308 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 A0A1W2PPL8 197 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 SLC35F4A4IF30 521 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 SPDYE2BA6NHP3 402 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 PSMD10O75832 226 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 SPDYE6P0CI01 402 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 TNNI1P19237 187 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 ATP5F1P24539 256 aaPredicted RBP8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 HRH2P25021 359 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 AZGP1P25311 298 aaKnown RBP8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 YWHAQP27348 245 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 AIF1P55008 147 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 HSF2Q03933 536 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 RELQ04864 619 aaPredicted RBP8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 RPA4Q13156 261 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 GRM3Q14832 879 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 FAM83EQ2M2I3 478 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 FUT11Q495W5 492 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 SPDYE2Q495Y8 402 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 TOR1AIP1Q5JTV8 583 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 PDSS1Q5T2R2 415 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 CAPN13Q6MZZ7 669 aaPredicted RBP8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 DPP8Q6V1X1 898 aaPredicted RBP8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 ARHGAP36Q6ZRI8 547 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 AHSA2Q719I0 299 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 C11orf96Q7Z7L8 435 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 CUZD1Q86UP6 607 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 ZC3HC1Q86WB0 502 aaKnown RBP8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 ZZZ3Q8IYH5 903 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 CYP4Z2PQ8N1L4 340 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 AGBL3Q8NEM8 1001 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 JOSD2Q8TAC2 188 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 VPS39Q96JC1 886 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 WDFY2Q96P53 400 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 QRFPRQ96P65 431 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 LRRC3Q9BY71 257 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 GPBP1L1Q9HC44 474 aaPredicted RBP8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 EIF2B3Q9NR50 452 aaKnown RBP8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 MLXQ9UH92 298 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 KCNMB2Q9Y691 235 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 A0A1W2PP18 115 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 RAB19A4D1S5 217 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 M0R082 166 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 ANKRD28O15084 1053 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 SLC16A4O15374 487 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 FABP7O15540 132 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 SIGLEC6O43699 453 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 HLA-EP13747 358 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 SOX11P35716 441 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 NRIP1P48552 1158 aa8.36□□□□□ -1.07
SRGAP1-202ENST00000537556 MYL6P60660 151 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms