RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 ITCHQ96J02 903 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 TBATAQ96M53 351 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 NEDD4LQ96PU5 975 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 PPP1R16BQ96T49 567 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 TMEM246Q9BRR3 403 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 GABARAPL3Q9BY60 117 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 MIR1-1HGQ9H1L0 117 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 WDCPQ9H6R7 721 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 SYTL2Q9HCH5 934 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 CSNK1G1Q9HCP0 422 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 SEMA4BQ9NPR2 832 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-215ENST00000536145 PLSCR3Q9NRY6 295 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 NDFIP2Q9NV92 336 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 C1orf109Q9NX04 203 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 ERAP1Q9NZ08 941 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 PSORS1C1Q9UIG5 152 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 MKLN1Q9UL63 735 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 CDH9Q9ULB4 789 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 SNX6Q9UNH7 406 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 RNF6Q9Y252 685 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 MAN2B2Q9Y2E5 1009 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 ASB1Q9Y576 335 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 LYVE1Q9Y5Y7 322 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 PTCH2Q9Y6C5 1203 aa6.79□□□□□ -1.32
CPSF7-215ENST00000536145 EVPLQ92817 2033 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 CCL22O00626 93 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 WNT9AO14904 365 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 GSTA4O15217 222 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 SHOXO15266 292 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 CD3EAPO15446 510 aaKnown RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 IRAK2O43187 625 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ICMTO60725 284 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 RPP40O75818 363 aaKnown RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 RECQL5O94762 991 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 PGLSO95336 258 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 CRYZL1O95825 349 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 SLC4A1P02730 911 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 CDK1P06493 297 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 USP17L7P0C7H9 530 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 DBTP11182 482 aaKnown RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 DPEP1P16444 411 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ITGA2P17301 1181 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ALOX12P18054 663 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 GABRB1P18505 474 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ITGB6P18564 788 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 M6PRP20645 277 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 CHMP24386 653 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 PTPN6P29350 595 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 PKLRP30613 574 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 NUDT1P36639 197 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 PRIM2P49643 509 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 AGTR2P50052 363 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 DEFA1P59665 94 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 DEFA3P59666 94 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 DSC2Q02487 901 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 STARD3Q14849 445 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 PCBP2Q15366 365 aaKnown RBP eCLIP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 TSNQ15631 228 aaKnown RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ZFP69Q49AA0 526 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 GTDC1Q4AE62 458 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ATP6AP1LQ52LC2 224 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 SIRPB2Q5JXA9 342 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 SNAP47Q5SQN1 464 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 FAM171A1Q5VUB5 890 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 WSCD1Q658N2 575 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 IL31Q6EBC2 164 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 OR2T5Q6IEZ7 315 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 LETMD1Q6P1Q0 360 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 PAQR3Q6TCH7 311 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ARMCX2Q7L311 632 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF551Q7Z340 670 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 GPR155Q7Z3F1 870 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 C14orf80Q86SX3 495 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ADAMTSL2Q86TH1 951 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 CCDC103Q8IW40 242 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 IQCF2Q8IXL9 164 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 PEX5LQ8IYB4 626 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ENTHD1Q8IYW4 607 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 C10orf111Q8N326 155 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 CARNMT1Q8N4J0 409 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 AMER2Q8N7J2 671 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 RTL3Q8N8U3 475 aaKnown RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 TTC29Q8NA56 475 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF540Q8NDQ6 660 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 OR2T29Q8NH02 315 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 OR10A6Q8NH74 314 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 NETO1Q8TDF5 533 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 SLC13A3Q8WWT9 602 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 SLC7A6Q92536 515 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 BHMTQ93088 406 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 FAM162AQ96A26 154 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 MARVELD3Q96A59 401 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 REPS1Q96D71 796 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 HHIPQ96QV1 700 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 APOL4Q9BPW4 351 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 DHRS9Q9BPW9 319 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 C16orf70Q9BSU1 422 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 TRAF4Q9BUZ4 470 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 FSD1LQ9BXM9 530 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 SPATC1LQ9H0A9 340 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms