RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNF23P17027 643 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 FASP25445 335 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 OXTRP30559 389 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 ETV3P41162 512 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 BOP1Q14137 746 aaKnown RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 PTGR1Q14914 329 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 DLEU7Q6UYE1 221 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 MTFMTQ96DP5 389 aaKnown RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 PPP3R2Q96LZ3 170 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 LRRC3BQ96PB8 259 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 KCTD14Q9BQ13 255 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 PIF1Q9H611 641 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 PCDH12Q9NPG4 1184 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 TRPS1Q9UHF7 1281 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 RGS14O43566 566 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 ZNF30P17039 623 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 SYN1P17600 705 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 JAK1P23458 1154 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 PPIGQ13427 754 aaKnown RBP eCLIP13.07□□□□□ -0.324e-6■■■□□ 15.5
VPS33B-202ENST00000535906 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 TRIM46Q7Z4K8 759 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 EPHX4Q8IUS5 362 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 RGL4Q8IZJ4 473 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 CBR4Q8N4T8 237 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 DPP10Q8N608 796 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 ZNF366Q8N895 744 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 ZNF557Q8N988 423 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-202ENST00000535906 TRPV3Q8NET8 790 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 ASB11Q8WXH4 323 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 RMND5BQ96G75 393 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-202ENST00000535906 SLC12A9Q9BXP2 914 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 FAM83DQ9H4H8 585 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 SLC32A1Q9H598 525 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 PARVBQ9HBI1 364 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 ZFP14Q9HCL3 533 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 THEGQ9P2T0 379 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 MANBAO00462 879 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 PLOD2O00469 737 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 DLGAP1O14490 977 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 PER2O15055 1255 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 SGTAO43765 313 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 NUAK1O60285 661 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 NPPAP01160 153 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 FCGR1AP12314 374 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 TIMP2P16035 220 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 CEBPBP17676 345 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 VIPR1P32241 457 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 GGT5P36269 586 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 CCT8P50990 548 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 PLIN5Q00G26 463 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 FPGSQ05932 587 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 KIAA0040Q15053 153 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 CPSF6Q16630 551 aaKnown RBP eCLIP13.07□□□□□ -0.32
VPS33B-202ENST00000535906 SLC44A4Q53GD3 710 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 ZNF648Q5T619 568 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-202ENST00000535906 HID1Q8IV36 788 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 TRIML2Q8N7C3 387 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 BEND7Q8N7W2 519 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-202ENST00000535906 HM13Q8TCT9 377 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 USP7Q93009 1102 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 PYCR2Q96C36 320 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 CENPNQ96H22 339 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-202ENST00000535906 PPM1MQ96MI6 270 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 C9orf16Q9BUW7 83 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 CAAP1Q9H8G2 361 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 MARK1Q9P0L2 795 aa13.07□□□□□ -0.32
VPS33B-202ENST00000535906 DYTNA2CJ06 578 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 EIF3FO00303 357 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-202ENST00000535906 ARNTLO00327 626 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 SLC28A1O00337 649 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 CLDN9O95484 217 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 ENO2P09104 434 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-202ENST00000535906 CYP2A6P11509 494 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-202ENST00000535906 VARSP26640 1264 aaKnown RBP13.06□□□□□ -0.32
VPS33B-202ENST00000535906 HOXA9P31269 272 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 GNPDA1P46926 289 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 EEFSECP57772 596 aaKnown RBP13.06□□□□□ -0.32
VPS33B-202ENST00000535906 TUBA4AP68366 448 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 PLOD1Q02809 727 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-202ENST00000535906 CYP51A1Q16850 503 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 RNF165Q6ZSG1 346 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 RTL10Q7L3V2 364 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 P2RY13Q9BPV8 354 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 ACTR8Q9H981 624 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 CLK4Q9HAZ1 481 aaKnown RBP13.06□□□□□ -0.32
VPS33B-202ENST00000535906 C8orf4Q9NR00 106 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 CEPT1Q9Y6K0 416 aa13.06□□□□□ -0.32
VPS33B-202ENST00000535906 TCRBV5S2A0A599 114 aa13.05□□□□□ -0.32
VPS33B-202ENST00000535906 KANSL1LA0AUZ9 987 aa13.05□□□□□ -0.32
VPS33B-202ENST00000535906 FAM149AA5PLN7 773 aa13.05□□□□□ -0.32
VPS33B-202ENST00000535906 FADS2P1A8MWK0 482 aa13.05□□□□□ -0.32
VPS33B-202ENST00000535906 UPK3BL1B0FP48 263 aa13.05□□□□□ -0.32
VPS33B-202ENST00000535906 UPK3BL2E5RIL1 263 aa13.05□□□□□ -0.32
VPS33B-202ENST00000535906 INPP4BO15327 924 aa13.05□□□□□ -0.32
VPS33B-202ENST00000535906 TPST1O60507 370 aa13.05□□□□□ -0.32
VPS33B-202ENST00000535906 XYLBO75191 536 aa13.05□□□□□ -0.32
VPS33B-202ENST00000535906 SEC22BO75396 215 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms