RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 SDR16C5Q8N3Y7 309 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 ANKRD42Q8N9B4 389 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 GIMAP7Q8NHV1 300 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 KCTD4Q8WVF5 259 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 NXNL1Q96CM4 212 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 CCDC97Q96F63 343 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-205ENST00000535900 LINGO1Q96FE5 620 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 ZNF317Q96PQ6 595 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-205ENST00000535900 OR2M4Q96R27 311 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 NRSN2Q9GZP1 204 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 COG4Q9H9E3 785 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 UCKL1Q9NWZ5 548 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-205ENST00000535900 ZNHIT2Q9UHR6 403 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 GOLGA4Q13439 2230 aaKnown RBP10.54□□□□□ -0.72
UBE3B-205ENST00000535900 LAMA5O15230 3695 aa10.54□□□□□ -0.72
UBE3B-205ENST00000535900 ANKRD11Q6UB99 2663 aaPredicted RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 CELSR3Q9NYQ7 3312 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 TMEM202A6NGA9 273 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 FOXO6A8MYZ6 492 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 TLX3O43711 291 aaPredicted RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 BRINP1O60477 761 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 KERAO60938 352 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 H2AFYO75367 372 aaKnown RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 SNUPNO95149 360 aaKnown RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 FAM107AO95990 144 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 TNFP01375 233 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 PROCP04070 461 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 RPN2P04844 631 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 TPBGLP0DKB5 382 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 TFEBP19484 476 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 HNRNPKP61978 463 aaKnown RBP eCLIP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 IRF9Q00978 393 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 E2F1Q01094 437 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 PPARDQ03181 441 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 HSPA14Q0VDF9 509 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 BOP1Q14137 746 aaKnown RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 ZNF460Q14592 562 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 TECRLQ5HYJ1 363 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 ZNF648Q5T619 568 aaPredicted RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 METRNLQ641Q3 311 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 METTL2BQ6P1Q9 378 aaKnown RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 TTC23LQ6PF05 361 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 LVRNQ6Q4G3 990 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 ENPP7Q6UWV6 458 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 WASH2PQ6VEQ5 465 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 ISCA2Q86U28 154 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 SLC22A9Q8IVM8 553 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 HOMEZQ8IX15 550 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 CPNE9Q8IYJ1 553 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 SLC25A45Q8N413 288 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 FSTL5Q8N475 847 aaPredicted RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 FBXO15Q8NCQ5 510 aaPredicted RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 PHC3Q8NDX5 983 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 LKAAEAR1Q8TD35 194 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 MAGEC3Q8TD91 643 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 EEF1AKMT1Q8WVE0 214 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 ANKRD49Q8WVL7 239 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 GRAMD1AQ96CP6 724 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 CHMP6Q96FZ7 201 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 SCYL1Q96KG9 808 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 FAM111AQ96PZ2 611 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 TRIM54Q9BYV2 358 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 NSRP1Q9H0G5 558 aaKnown RBP10.53□□□□□ -0.72
UBE3B-205ENST00000535900 RDH14Q9HBH5 336 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 FGF22Q9HCT0 170 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 WASH6PQ9NQA3 447 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 NLGN3Q9NZ94 848 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 TMEM216Q9P0N5 145 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 SIRPGQ9P1W8 387 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 SUFUQ9UMX1 484 aa10.53□□□□□ -0.72
UBE3B-205ENST00000535900 PABPN1LA6NDY0 278 aaKnown RBP10.52□□□□□ -0.73
UBE3B-205ENST00000535900 NEMP2A6NFY4 417 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 PRR19A6NJB7 356 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 TARM1B6A8C7 271 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 GFYI3L273 518 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 IFRD1O00458 451 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-205ENST00000535900 SMIM24O75264 130 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 MATN4O95460 622 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 MT-CO3P00414 261 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 CATP04040 527 aaKnown RBP10.52□□□□□ -0.73
UBE3B-205ENST00000535900 MYL2P10916 166 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 SLC2A4P14672 509 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 CPA3P15088 417 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 ITGB6P18564 788 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 IDSP22304 550 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 ATP5F1P24539 256 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-205ENST00000535900 ITPKBP27987 946 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 EIF2S3P41091 472 aaKnown RBP10.52□□□□□ -0.73
UBE3B-205ENST00000535900 SERPINB4P48594 390 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 HK3P52790 923 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 AP1S2P56377 157 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 CDKL1Q00532 357 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 NFKB2Q00653 900 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 ILF3Q12906 894 aaKnown RBP eCLIP10.52□□□□□ -0.73
UBE3B-205ENST00000535900 DLG1Q12959 904 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 RTP5Q14D33 572 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 ZNF542PQ5EBM4 170 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 ACSBG2Q5FVE4 666 aa10.52□□□□□ -0.73
UBE3B-205ENST00000535900 CRTC3Q6UUV7 619 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms