RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ISXQ2M1V0 245 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 MAP9Q49MG5 647 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 CCSMST1Q4G0I0 132 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 WDR74Q6RFH5 385 aaPredicted RBP11.72□□□□□ -0.53
CHD4-203ENST00000535717 ERMP1Q7Z2K6 904 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 B3GNT8Q7Z7M8 397 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 RASGRP3Q8IV61 690 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 DCUN1D3Q8IWE4 304 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 CACTIN-AS1Q8N1I8 211 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 GALNT15Q8N3T1 639 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 AENQ8WTP8 325 aaKnown RBP11.72□□□□□ -0.53
CHD4-203ENST00000535717 ASB11Q8WXH4 323 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 LINGO1Q96FE5 620 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 TSPAN17Q96FV3 270 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 FOPNLQ96NB1 174 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 PAFAH2Q99487 392 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 SEMA6CQ9H3T2 930 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 SRMSQ9H3Y6 488 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 XKR8Q9H6D3 395 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 CIDEBQ9UHD4 219 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 KLK13Q9UKR3 277 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 PLAGL1Q9UM63 463 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 ICKQ9UPZ9 632 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 IGHV5-10-1A0A0J9YXX1 117 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 MED19A0JLT2 244 aaPredicted RBP11.71□□□□□ -0.53
CHD4-203ENST00000535717 KRT87PA6NCN2 255 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 ARHGEF33A8MVX0 844 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 POC1B-GALNT4F8VUJ3 575 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 GFYI3L273 518 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 PHGDHO43175 533 aaKnown RBP11.71□□□□□ -0.53
CHD4-203ENST00000535717 WISP3O95389 354 aaPredicted RBP11.71□□□□□ -0.53
CHD4-203ENST00000535717 ZNF37AP17032 561 aaPredicted RBP11.71□□□□□ -0.53
CHD4-203ENST00000535717 MPSTP25325 297 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 CCNFP41002 786 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 MSH2P43246 934 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 RGS4P49798 205 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 SLC12A2P55011 1212 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 PPP1CAP62136 330 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 ZFP36L1Q07352 338 aaKnown RBP11.71□□□□□ -0.53
CHD4-203ENST00000535717 BMPR2Q13873 1038 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 ZKSCAN8Q15776 578 aaPredicted RBP11.71□□□□□ -0.53
CHD4-203ENST00000535717 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.71□□□□□ -0.53
CHD4-203ENST00000535717 MROH9Q5TGP6 573 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 LRRC8EQ6NSJ5 796 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 TMEM71Q6P5X7 295 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 KLHL35Q6PF15 583 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 AMIGO1Q86WK6 493 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 SLITRK4Q8IW52 837 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 OR4D9Q8NGE8 314 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 DCAKDQ8WVC6 231 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 ANKRD49Q8WVL7 239 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 UBLCP1Q8WVY7 318 aaPredicted RBP11.71□□□□□ -0.53
CHD4-203ENST00000535717 DEPDC7Q96QD5 511 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 DPYSL5Q9BPU6 564 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 MENTQ9BUN1 341 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 SCNM1Q9BWG6 230 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 POPDC3Q9HBV1 291 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 HRASLS2Q9NWW9 162 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 PDP2Q9P2J9 529 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 RAB21Q9UL25 225 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 ENTPD2Q9Y5L3 495 aa11.71□□□□□ -0.53
CHD4-203ENST00000535717 MN1Q10571 1320 aaPredicted RBP11.7□□□□□ -0.54
CHD4-203ENST00000535717 EXOC1LA0A1B0GW35 172 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 FAM221BA6H8Z2 402 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 OR5K3A6NET4 321 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 BTN3A3O00478 584 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 BTN3A1O00481 513 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 CAPN5O15484 640 aaPredicted RBP11.7□□□□□ -0.54
CHD4-203ENST00000535717 C9P02748 559 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 INHBAP08476 426 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 STMN1P16949 149 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 POLR2CP19387 275 aaPredicted RBP11.7□□□□□ -0.54
CHD4-203ENST00000535717 GCAP28676 217 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 PKLRP30613 574 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 SHMT2P34897 504 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 INHBCP55103 352 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 GFERP55789 205 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 RAB10P61026 200 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 EMBQ6PCB8 327 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 TTC23LQ6PF05 361 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 CMC1Q7Z7K0 106 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 OOSP2Q86WS3 158 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 PLXDC1Q8IUK5 500 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 ADGRF3Q8IZF5 1079 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 MYO1HQ8N1T3 1032 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 NKAPQ8N5F7 415 aaKnown RBP11.7□□□□□ -0.54
CHD4-203ENST00000535717 LMNTD1Q8N9Z9 388 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 DLG3Q92796 817 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 RAD51AP1Q96B01 352 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 PDLIM5Q96HC4 596 aaKnown RBP11.7□□□□□ -0.54
CHD4-203ENST00000535717 CCDC74BQ96LY2 380 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 TMEM74Q96NL1 305 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 IL17FQ96PD4 163 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 TGM7Q96PF1 710 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 DHRS4Q9BTZ2 278 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 RAB33BQ9H082 229 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 SYTL2Q9HCH5 934 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 GPAMQ9HCL2 828 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 EPHA6Q9UF33 1036 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 ADAMTS6Q9UKP5 1117 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms