RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 BRAT1Q6PJG6 821 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 WDR88Q6ZMY6 472 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 CFAP77Q6ZQR2 320 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 TRMT10CQ7L0Y3 403 aaKnown RBP4.41□□□□□ -1.7
GYPA-211ENST00000535709 VPS36Q86VN1 386 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 FAM228AQ86W67 206 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 PDSS2Q86YH6 399 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 RASAL3Q86YV0 1011 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 TRIM48Q8IWZ4 208 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 LSMEM2Q8N112 164 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 PQLC1Q8N2U9 271 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 GPR137CQ8N3F9 429 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 UXS1Q8NBZ7 420 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 C11orf65Q8NCR3 313 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 MBD3L2Q8NHZ7 208 aaPredicted RBP4.41□□□□□ -1.7
GYPA-211ENST00000535709 MYCBPAPQ8TBZ2 947 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 RNASE8Q8TDE3 154 aaKnown RBP4.41□□□□□ -1.7
GYPA-211ENST00000535709 ZNF480Q8WV37 535 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 RHBDF1Q96CC6 855 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 RNFT2Q96EX2 444 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 SLC47A1Q96FL8 570 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 ZSWIM3Q96MP5 696 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 OR2A14Q96R47 310 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 CYTH2Q99418 400 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 ASCL2Q99929 193 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 KCNS3Q9BQ31 491 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 SPATA5L1Q9BVQ7 753 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 SF3B5Q9BWJ5 86 aaKnown RBP4.41□□□□□ -1.7
GYPA-211ENST00000535709 PLA2G12BQ9BX93 195 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 KLC2Q9H0B6 622 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 SLC26A1Q9H2B4 701 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 PLK3Q9H4B4 646 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 CCDC134Q9H6E4 229 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 GPR35Q9HC97 309 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 TREM1Q9NP99 234 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 SLC39A1Q9NY26 324 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 DLGAP2Q9P1A6 1054 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 DNMT3BQ9UBC3 853 aaKnown RBP4.41□□□□□ -1.7
GYPA-211ENST00000535709 XPR1Q9UBH6 696 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 PALD1Q9ULE6 856 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 PLA2G2DQ9UNK4 145 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 RCE1Q9Y256 329 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 SLC9A8Q9Y2E8 581 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 MFHAS1Q9Y4C4 1052 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 LRP5O75197 1615 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 PHLPP2Q6ZVD8 1323 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 RAD50Q92878 1312 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 CACNA1SQ13698 1873 aa4.41□□□□□ -1.7
GYPA-211ENST00000535709 AKAP11Q9UKA4 1901 aa4.4□□□□□ -1.7
GYPA-211ENST00000535709 KIF13BQ9NQT8 1826 aa4.4□□□□□ -1.7
GYPA-211ENST00000535709 LOC105369274A0A096LPK9 316 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 A0A0A6YYC8 382 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 LOC102723532A0A0G2JNH3 316 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 A0A0J9YYE9 177 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 A0A1B0GVM2 712 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 TCRBV5S2A0A599 114 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 LNP1A1A4G5 178 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 NPIPB13A6NJU9 1138 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 OR52A4PA6NMU1 304 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 NPIPB4C9JG80 1138 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 I3L1I5 382 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 SNAP23O00161 211 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 PSMD11O00231 422 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 TEX33O43247 280 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 PRICKLE3O43900 615 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 PEX1O43933 1283 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 PRSS23O95084 383 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 OR5F1O95221 314 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 CXCL14O95715 111 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 TGM6O95932 706 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 TRBC1P01850 177 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 PGK2P07205 417 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 UBTFL1P0CB47 393 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 PIM1P11309 404 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 CDK4P11802 303 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 NCF2P19878 526 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 DRD5P21918 477 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 POU1F1P28069 291 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 PKLRP30613 574 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 TIA1P31483 386 aaKnown RBP eCLIP4.4□□□□□ -1.71
GYPA-211ENST00000535709 SLC6A4P31645 630 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 EVI2BP34910 448 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 TRIM23P36406 574 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 ALDH3B1P43353 468 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 PCP4P48539 62 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 CRYBB1P53674 252 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 ATP12AP54707 1039 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 AIF1P55008 147 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 GSCP56915 257 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 DLX2Q07687 328 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 KLF10Q13118 480 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 SNAPC1Q16533 368 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 TPD52L1Q16890 204 aaPredicted RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 TBC1D25Q3MII6 688 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 FAM98BQ52LJ0 330 aaKnown RBP4.4□□□□□ -1.71
GYPA-211ENST00000535709 ZMAT1Q5H9K5 638 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 SPANXN2Q5MJ10 180 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 ARHGAP40Q5TG30 622 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 PMS2CLQ68D20 193 aa4.4□□□□□ -1.71
GYPA-211ENST00000535709 PRR5LQ6MZQ0 368 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms