RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TSPY8P0CW00 308 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 IGHV4-30-4P0DP06 118 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 FCGR1AP12314 374 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 GJA1P17302 382 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 RDXP35241 583 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 CDKN2AP42771 156 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 KRTAP1-1Q07627 177 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 PRPF4BQ13523 1007 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 BAATQ14032 418 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 CTTNQ14247 550 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 GPNMBQ14956 572 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 MED22Q15528 200 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 MEA1Q16626 185 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF284Q2VY69 593 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 SGO1Q5FBB7 561 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ASPHD1Q5U4P2 390 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 NUGGCQ68CJ6 796 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 LRRC8EQ6NSJ5 796 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ANKRD54Q6NXT1 300 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF549Q6P9A3 640 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 PQLC2Q6ZP29 291 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 C9orf47Q6ZRZ4 202 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 Q6ZSV7 163 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ADGRA1Q86SQ6 560 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 RBM23Q86U06 439 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 GPR180Q86V85 440 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 SERINC5Q86VE9 423 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 EXOC3L1Q86VI1 746 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 FBXO16Q8IX29 292 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 TTC30BQ8N4P2 665 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 POMGNT2Q8NAT1 580 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 TDRD5Q8NAT2 981 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 PPTC7Q8NI37 304 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ATP8B4Q8TF62 1192 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 RSPH1Q8WYR4 309 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF689Q96CS4 500 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 RTP4Q96DX8 246 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 DACH2Q96NX9 599 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 QRFPRQ96P65 431 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 SMC6Q96SB8 1091 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 NACAP1Q9BZK3 213 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 GHITMQ9H3K2 345 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 SMARCAL1Q9NZC9 954 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 SEC63Q9UGP8 760 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 POU2F3Q9UKI9 436 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ACSL5Q9ULC5 683 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 LOXL2Q9Y4K0 774 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 DMDP11532 3685 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 SHROOM3Q8TF72 1996 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 PLXNA4Q9HCM2 1894 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ADGRA3Q8IWK6 1321 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 NRCAMQ92823 1304 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF532Q9HCE3 1301 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 EVPLQ92817 2033 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 FASNP49327 2511 aaKnown RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 IGLV5-37A0A075B6J1 123 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 FRMD3A2A2Y4 597 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 DYTNA2CJ06 578 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 BECN2A8MW95 431 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 INAFM1C9JVW0 142 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 HAS3O00219 553 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 MAP2K7O14733 419 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ACOT8O14734 319 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 LDLRAD4O15165 306 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 OGG1O15527 345 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 LINC01565O15544 149 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 KCNN4O15554 427 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 RFPL2O75678 378 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 STAM2O75886 525 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 PROS1P07225 676 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 SP9P0CG40 484 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 RARGP13631 454 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 CCKBRP32239 447 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 HOXD13P35453 343 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 GNL1P36915 607 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 PBX3P40426 434 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 USP8P40818 1118 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 PCYT1AP49585 367 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 CAMPP49913 170 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 MXI1P50539 228 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 SNX16P57768 344 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 TAS2R40P59535 323 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 PDE1BQ01064 536 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 Q0VFX4 171 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 STK4Q13043 487 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 KCNC3Q14003 757 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 KRT33BQ14525 404 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 COL28A1Q2UY09 1125 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 RAB41Q5JT25 222 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 GKAP1Q5VSY0 366 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ZDHHC20Q5W0Z9 365 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 FAM205BPQ63HN1 556 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 CTR9Q6PD62 1173 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 DPPA4Q7L190 304 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 CHST3Q7LGC8 479 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 KRT74Q7RTS7 529 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 TMCO2Q7Z6W1 182 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 PRPF39Q86UA1 669 aaKnown RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 SLC35F3Q8IY50 421 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 THNSL1Q8IYQ7 743 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms