RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 FAM172BPA6NC97 362 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 TEX46H3BTG2 121 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 NRP1O14786 923 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 PLGLB1Q02325 96 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 FUT2Q10981 343 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 PUM1Q14671 1186 aaKnown RBP eCLIP17.85■□□□□ 0.454e-7■□□□□ 11.1
SFSWAP-203ENST00000535236 MBOAT1Q6ZNC8 495 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 P4HA3Q7Z4N8 544 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 MGME1Q9BQP7 344 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 TBL1XR1Q9BZK7 514 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 SUV39H2Q9H5I1 410 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 GMEB2Q9UKD1 530 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 COL3A1P02461 1466 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 CAPN8A6NHC0 703 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 TNFP01375 233 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF8P17098 575 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 DNAJB7Q7Z6W7 309 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 SCAMP5Q8TAC9 235 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ACDQ96AP0 544 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 DHRS1Q96LJ7 313 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ZSWIM3Q96MP5 696 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ADH5P11766 374 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF781Q8N8C0 355 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 PIK3R3Q92569 461 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 HAPLN3Q96S86 360 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ADGRB1O14514 1584 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 TOR1AIP1Q5JTV8 583 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 AKAP14Q86UN6 197 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC30A8Q8IWU4 369 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 NKD1Q969G9 470 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 ESAMQ96AP7 390 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 IGSF9Q9P2J2 1179 aa17.85■□□□□ 0.45
SFSWAP-203ENST00000535236 SAP18O00422 153 aaKnown RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 PCDH7O60245 1069 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 JAM2P57087 298 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 MBLAC2Q68D91 279 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 KIAA0930Q6ICG6 404 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC13A3Q8WWT9 602 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 BORCS5Q969J3 196 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 CENPNQ96H22 339 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 MTERF1Q99551 399 aaKnown RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 PCDHB11Q9Y5F2 797 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 SPATA31D1Q6ZQQ2 1576 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF726A6NNF4 738 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 IRAK2O43187 625 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 ACVR2AP27037 513 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC1A2P43004 574 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 FAM174BQ3ZCQ3 159 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 TNFAIP8L2Q6P589 184 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 USP30Q70CQ3 517 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 NUDT13Q86X67 352 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 MMAAQ8IVH4 418 aaKnown RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 FSTL5Q8N475 847 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 TNFAIP8L1Q8WVP5 186 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 SIPA1Q96FS4 1042 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 TRMT61BQ9BVS5 477 aaKnown RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 TCF7L1Q9HCS4 588 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 UPB1Q9UBR1 384 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 DUXAA6NLW8 204 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 K7EPI3 171 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 DLG1Q12959 904 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 SLC25A36Q96CQ1 311 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 C12orf65Q9H3J6 166 aaKnown RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF446Q9NWS9 450 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 RAB26Q9ULW5 256 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 REM1O75628 298 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 NCK1P16333 377 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 GPR33Q49SQ1 333 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 C6orf52Q5T4I8 152 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 ZDHHC21Q8IVQ6 265 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 TBC1D17Q9HA65 648 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 YIPF1Q9Y548 306 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 INSL6Q9Y581 213 aa17.84■□□□□ 0.45
SFSWAP-203ENST00000535236 PITPNM1O00562 1244 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 SATL1Q86VE3 508 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 GPALPP1Q8IXQ4 340 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 FAXDC2Q96IV6 333 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 SHDQ96IW2 340 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 C8orf48Q96LL4 319 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 PHF12Q96QT6 1004 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF347Q96SE7 839 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 LPIN3Q9BQK8 851 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 APOBEC3GQ9HC16 384 aaKnown RBP17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 FARSBQ9NSD9 589 aaKnown RBP17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 MOCS1Q9NZB8 636 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 A0A1W2PRB8 838 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 PDCD5O14737 125 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 PGRP06401 933 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 ASPAP45381 313 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 ALG1LQ6GMV1 187 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 ADNP2Q6IQ32 1131 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 ZNF527Q8NB42 609 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 DGAT2Q96PD7 388 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 LENG8Q96PV6 779 aaPredicted RBP17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 RIOK2Q9BVS4 552 aaKnown RBP17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 DGKBQ9Y6T7 804 aa17.83■□□□□ 0.45
SFSWAP-203ENST00000535236 A8MUA0 341 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 AREL1O15033 823 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 PRKCGP05129 697 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms