RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 OR2T34Q8NGX1 318 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 OR2T3Q8NH03 318 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 OR52J3Q8NH60 311 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 PYCR2Q96C36 320 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 CLCC1Q96S66 551 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 SGIP1Q9BQI5 828 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 ARHGAP39Q9C0H5 1083 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 IL23AQ9NPF7 189 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 RAPGEFL1Q9UHV5 662 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 NID2Q14112 1375 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 OR51F1A6NGY5 319 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 C9JVG2 144 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 PSMD11O00231 422 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 CASKO14936 926 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 ADAMDEC1O15204 470 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 CHST10O43529 356 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 PCDH7O60245 1069 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 NPHS1O60500 1241 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 TCEA3O75764 348 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 GALTP07902 379 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 FOSL2P15408 326 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 TYRP1P17643 537 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 CSNK2A2P19784 350 aaPredicted RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 NCBP2P52298 156 aaKnown RBP eCLIP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 NR1H2P55055 460 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 GDF10P55107 478 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 SIM2Q14190 667 aaPredicted RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 EIPR1Q53HC9 387 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 AGAP11Q8TF27 550 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 CDKN2AIPNLQ96HQ2 116 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 DGAT2Q96PD7 388 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 TWNKQ96RR1 684 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 NKX2-4Q9H2Z4 354 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 ARL8BQ9NVJ2 186 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 MCUBQ9NWR8 336 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 RPL26L1Q9UNX3 145 aaKnown RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 TMEM98Q9Y2Y6 226 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 DUXAA6NLW8 204 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 CPSF4LA6NMK7 179 aaKnown RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 ZBTB22O15209 634 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 NIPSNAP2O75323 286 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 RSL1D1O76021 490 aaKnown RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 RHOP08100 348 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 ZNF823P16415 610 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 RPL6Q02878 288 aaKnown RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 RBBP4Q09028 425 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 TRAP1Q12931 704 aaKnown RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 DPY19L1Q2PZI1 675 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 HKDC1Q2TB90 917 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 VWA5B1Q5TIE3 1220 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 CDCA2Q69YH5 1023 aaPredicted RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 C22orf39Q6P5X5 142 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 PARP8Q8N3A8 854 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 FAR1Q8WVX9 515 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 SMPDL3AQ92484 453 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 COX4I2Q96KJ9 171 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 NSMCE3Q96MG7 304 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 DUSP26Q9BV47 211 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 LDAHQ9H6V9 325 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 RNF121Q9H920 327 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 DNAAF2Q9NVR5 837 aaKnown RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 ZNF282Q9UDV7 671 aaPredicted RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 CA14Q9ULX7 337 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 AP4B1Q9Y6B7 739 aa6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 OAS3Q9Y6K5 1087 aaKnown RBP6.27□□□□□ -1.41
UBQLN1-206ENST00000533705 TCRBV21S2A2A0A5A6 115 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 PRORSD1PA6NEY8 169 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 J3KR12 359 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 HAS3O00219 553 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 PITPNM1O00562 1244 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 AXIN1O15169 862 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 PRODHO43272 600 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 SSNA1O43805 119 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 TPST2O60704 377 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 NME6O75414 186 aaPredicted RBP6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 CLDN7O95471 211 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 STATHP02808 62 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 MAGEA11P43364 429 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 YAP1P46937 504 aaKnown RBP6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 DNASE1L1P49184 302 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 RIPK1Q13546 671 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 GFOD2Q3B7J2 385 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 ZNF311Q5JNZ3 666 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 HFE2Q6ZVN8 426 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 SLC9B2Q86UD5 537 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 OSTM1Q86WC4 334 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 PQLC1Q8N2U9 271 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 ZNF433Q8N7K0 673 aaPredicted RBP6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 DCAKDQ8WVC6 231 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 ART5Q96L15 291 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 RBM4BQ9BQ04 359 aaKnown RBP6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 RBM4Q9BWF3 364 aaKnown RBP6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 ADAM7Q9H2U9 754 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 ALG2Q9H553 416 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 SIX2Q9NPC8 291 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 C8orf4Q9NR00 106 aa6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 ZCCHC3Q9NUD5 404 aaKnown RBP6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 IFT80Q9P2H3 777 aaPredicted RBP6.26□□□□□ -1.41
UBQLN1-206ENST00000533705 DNAJB4Q9UDY4 337 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms