RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SLCO2B1O94956 709 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 TCP1P17987 556 aaKnown RBP29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 DLSTP36957 453 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 EIF3BP55884 814 aaKnown RBP29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 TYSND1Q2T9J0 566 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 RNF187Q5TA31 235 aaPredicted RBP29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 SPESP1Q6UW49 350 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 STARD8Q92502 1023 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 TRAPPC9Q96Q05 1148 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 TCF12Q99081 682 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 FANCEQ9HB96 536 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 OR6C2Q9NZP2 312 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 PLAGL1Q9UM63 463 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 FASNP49327 2511 aaKnown RBP29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 FAM237BA0A1B0GVD1 139 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 KPNA5O15131 536 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 MAP3K7O43318 606 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 NTRK1P04629 796 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 CHRM5P08912 532 aaPredicted RBP29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 F8A1P23610 371 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 MC1RQ01726 317 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 ABRQ12979 859 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 CTSL3PQ5NE16 218 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 NAT8LQ8N9F0 302 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 LPGAT1Q92604 370 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 BIRC8Q96P09 236 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 TRIM56Q9BRZ2 755 aaKnown RBP29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 SYTL2Q9HCH5 934 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 LHX9Q9NQ69 397 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 LATS2Q9NRM7 1088 aa29.32■■■□□ 2.28
SSSCA1-207ENST00000533115 TERTO14746 1132 aaKnown RBP29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 SCRG1O75711 98 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 RPN2P04844 631 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 PVRP15151 417 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 OGNP20774 298 aaKnown RBP29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 FMO4P31512 558 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 DHX34Q14147 1143 aaKnown RBP29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 PPP1R7Q15435 360 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 ANKRD20A4Q4UJ75 823 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 UNC5DQ6UXZ4 953 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 HOOK3Q86VS8 718 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 TMEM126BQ8IUX1 230 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 CFAP61Q8NHU2 1237 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 CATSPER2Q96P56 530 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 OR2A14Q96R47 310 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 TWSG1Q9GZX9 223 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 KLHL25Q9H0H3 589 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 SPHK1Q9NYA1 384 aa29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 MRPS18BQ9Y676 258 aaKnown RBP29.31■■■□□ 2.28
SSSCA1-207ENST00000533115 CPNE3O75131 537 aaKnown RBP29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 MSL3P1P0C860 447 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 PRKAR1AP10644 381 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 UGT2B7P16662 529 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 MAGEA3P43357 314 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 CDC20Q12834 499 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 NEPROQ6NW34 567 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 BORAQ6PGQ7 559 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 OTOAQ7RTW8 1153 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 PPIL6Q8IXY8 311 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 GSDMBQ8TAX9 411 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 ZNF669Q96BR6 464 aaPredicted RBP29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 KCND3Q9UK17 655 aa29.3■■■□□ 2.28
SSSCA1-207ENST00000533115 FAM87AP0C7U9 286 aa29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 TCN2P20062 427 aa29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 ADARP55265 1226 aaKnown RBP29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 GNG11P61952 73 aa29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 KYNUQ16719 465 aa29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 CRTC2Q53ET0 693 aaPredicted RBP29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 PLEKHS1Q5SXH7 462 aa29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 TMEM135Q86UB9 458 aa29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 CILP2Q8IUL8 1156 aa29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 DCUN1D3Q8IWE4 304 aa29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 DDX47Q9H0S4 455 aaKnown RBP29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 IL1RAPL1Q9NZN1 696 aa29.29■■■□□ 2.28
SSSCA1-207ENST00000533115 TMEM150CB9EJG8 249 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 H3BMM5 538 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 ESR1P03372 595 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 PKLRP30613 574 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 RAB28P51157 221 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 RNASEH2BQ5TBB1 312 aaKnown RBP29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 C16orf46Q6P387 395 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 CENPUQ71F23 418 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 TRIM73Q86UV7 250 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 OR1L3Q8NH93 324 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 FLVCR1-AS1Q8TAF5 88 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 CT55Q8WUE5 264 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 PYCARDQ9ULZ3 195 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 CRYL1Q9Y2S2 319 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 PCDHB3Q9Y5E6 796 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 PCDHGA6Q9Y5G7 932 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 COL6A6A6NMZ7 2263 aa29.28■■■□□ 2.28
SSSCA1-207ENST00000533115 ZCWPW2A0A1B0GU75 182 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 KATNA1O75449 491 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 OAS2P29728 719 aaKnown RBP29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 DNASE1L3Q13609 305 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 GRB7Q14451 532 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 KIR2DS3Q14952 304 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 PAPD7Q5XG87 772 aaKnown RBP29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 CDHR3Q6ZTQ4 885 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 AGGF1Q8N302 714 aaeCLIP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 630.8 ms