RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 MTHFD1P11586 935 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 NDUFS1P28331 727 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 LEPRP48357 1165 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 PPM1FP49593 454 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 VSNL1P62760 191 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 VAC14Q08AM6 782 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 RPA4Q13156 261 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 CTSL3PQ5NE16 218 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 DCAF12Q5T6F0 453 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 INO80CQ6PI98 192 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 NAPRTQ6XQN6 538 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 TRMT10CQ7L0Y3 403 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 OTOAQ7RTW8 1153 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 PRSS42Q7Z5A4 293 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 STRA8Q7Z7C7 330 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 RELL1Q8IUW5 271 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 CNTN4Q8IWV2 1026 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 PPM1NQ8N819 430 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 LKAAEAR1Q8TD35 194 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 ZDHHC12Q96GR4 267 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 UBL7Q96S82 380 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 CCNL2Q96S94 520 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 SPRY4Q9C004 299 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 ZMYND15Q9H091 742 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 P2RY12Q9H244 342 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 OCIAD1Q9NX40 245 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 SLC39A1Q9NY26 324 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 HEBP2Q9Y5Z4 205 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 COLEC10Q9Y6Z7 277 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 FAM159BA6NKW6 160 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 EFCAB7A8K855 629 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 CXorf49A8MYA2 514 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 STMND1H3BQB6 276 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 IFRD1O00458 451 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 KPNA5O15131 536 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 NIPSNAP2O75323 286 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 AHSGP02765 367 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 SAT1P21673 171 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 MAPK9P45984 424 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 PREPP48147 710 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 ADARP55265 1226 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 CXADRP78310 365 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 PLOD1Q02809 727 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 HSPA14Q0VDF9 509 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 KRT33BQ14525 404 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 UAP1Q16222 522 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 KBTBD12Q3ZCT8 623 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 SLC26A11Q86WA9 606 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 CARFQ8N187 725 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 LILRA3Q8N6C8 439 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 SKA2Q8WVK7 121 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 KLHL6Q8WZ60 621 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 RSC1A1Q92681 617 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 ELMO2Q96JJ3 720 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 C12orf66Q96MD2 445 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 BIRC8Q96P09 236 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 CYTH2Q99418 400 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 NDNQ99608 321 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 PARD6BQ9BYG5 372 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 WWP1Q9H0M0 922 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 OR52A5Q9H2C5 316 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 ZNF768Q9H5H4 540 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 KIR3DX1Q9H7L2 352 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 SMYD2Q9NRG4 433 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 SIDT1Q9NXL6 827 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 RALYQ9UKM9 306 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 PCDHB11Q9Y5F2 797 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 B3GALT1Q9Y5Z6 326 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 PSAT1Q9Y617 370 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 COMMD10Q9Y6G5 202 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 CACNA1GO43497 2377 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 BPTFQ12830 3046 aa12.6□□□□□ -0.39
TRAPPC4-212ENST00000533058 NBEAQ8NFP9 2946 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 A0A087WUV0 522 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 A8MU76 341 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 TK2O00142 265 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 LIN7AO14910 233 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 VPS26AO75436 327 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 TYRP1P17643 537 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 CCR7P32248 378 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 SLC12A2P55011 1212 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 GFERP55789 205 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 RHDQ02161 417 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 NAB1Q13506 487 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 NAA30Q147X3 362 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 EFTUD2Q15029 972 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 TTLL9Q3SXZ7 439 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 SOWAHCQ53LP3 525 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 SNAP47Q5SQN1 464 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 UBAP2Q5T6F2 1119 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 UGT3A1Q6NUS8 523 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 WDR93Q6P2C0 686 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 CEACAM20Q6UY09 585 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 CCDC81Q6ZN84 652 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 CYS1Q717R9 158 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 ZFAND4Q86XD8 727 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 FAM129CQ86XR2 697 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms