RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TIPARPQ7Z3E1 657 aaKnown RBP14.9□□□□□ -0.02
CPSF1-210ENST00000532935 RASGRP3Q8IV61 690 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 DENND6AQ8IWF6 608 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 NLGN4XQ8N0W4 816 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 IL22RA1Q8N6P7 574 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.9□□□□□ -0.02
CPSF1-210ENST00000532935 NLGN4YQ8NFZ3 816 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-210ENST00000532935 CFAP61Q8NHU2 1237 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 GSDMBQ8TAX9 411 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 KRT12Q99456 494 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 PDE7BQ9NP56 450 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 ACTR10Q9NZ32 417 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 PLAGL1Q9UM63 463 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 FAM169AQ9Y6X4 670 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 CACNA1GO43497 2377 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 PIPSLA2A3N6 862 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 SLC9B1P1A6NJY1 282 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 KDM1AO60341 852 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 BANF1O75531 89 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 DLGAP3O95886 979 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 F7P08709 466 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-210ENST00000532935 PKMP14618 531 aaKnown RBP14.89□□□□□ -0.03
CPSF1-210ENST00000532935 ZNF28P17035 718 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 MAP4P27816 1152 aaKnown RBP14.89□□□□□ -0.03
CPSF1-210ENST00000532935 SLC1A2P43004 574 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 CTBP1Q13363 440 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 CRYMQ14894 314 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 BBS9Q3SYG4 887 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.89□□□□□ -0.03
CPSF1-210ENST00000532935 MSS51Q4VC12 460 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 SYT10Q6XYQ8 523 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 PPP1R3BQ86XI6 285 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 DCUN1D3Q8IWE4 304 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 LMNTD2Q8IXW0 634 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 CALML6Q8TD86 181 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 FAM136AQ96C01 138 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 RNF31Q96EP0 1072 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 UBL7Q96S82 380 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-210ENST00000532935 EBNA1BP2Q99848 306 aaKnown RBP14.89□□□□□ -0.03
CPSF1-210ENST00000532935 PITPNM3Q9BZ71 974 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 ULBP3Q9BZM4 244 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 FBXO6Q9NRD1 293 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-210ENST00000532935 SOHLH2Q9NX45 425 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 OR6C2Q9NZP2 312 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 RARRES3Q9UL19 164 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 BTRCQ9Y297 605 aa14.89□□□□□ -0.03
CPSF1-210ENST00000532935 SMAPO00193 183 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 KALRNO60229 2985 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 SPAG6O75602 509 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 KIAA0754O94854 1291 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 SEC31AO94979 1220 aaKnown RBP14.88□□□□□ -0.03
CPSF1-210ENST00000532935 TTC4O95801 387 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 CHRM5P08912 532 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-210ENST00000532935 LIFP15018 202 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 ST6GAL1P15907 406 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 WT1P19544 449 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-210ENST00000532935 CHRM3P20309 590 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 ITGA8P53708 1063 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 MAP7Q14244 749 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 KYNUQ16719 465 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 HSP90AA5PQ58FG0 334 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 TMTC4Q5T4D3 741 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 HIBCHQ6NVY1 386 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-210ENST00000532935 SPESP1Q6UW49 350 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 KCNMB4Q86W47 210 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 BPHLQ86WA6 291 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-210ENST00000532935 IGDCC3Q8IVU1 814 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 UNC5BQ8IZJ1 945 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 PDIK1LQ8N165 341 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 SKA2Q8WVK7 121 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-210ENST00000532935 SNF8Q96H20 258 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 PWWP2AQ96N64 755 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 FAM167BQ9BTA0 163 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 NAT9Q9BTE0 207 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 TRIM31Q9BZY9 425 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 FGF21Q9NSA1 209 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 SPHK1Q9NYA1 384 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 GALPQ9UBC7 116 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 FBXO5Q9UKT4 447 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 PCDHGA4Q9Y5G9 962 aa14.88□□□□□ -0.03
CPSF1-210ENST00000532935 E5RI56 91 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 TIAF1O95411 115 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 UGT2B7P16662 529 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 ATP5DP30049 168 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 PKLRP30613 574 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 RAB28P51157 221 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 TUBB4BP68371 445 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 MPP1Q00013 466 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 RHDQ02161 417 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 ABHD18Q0P651 414 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 TUBB2AQ13885 445 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 GBX1Q14549 363 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 GPR19Q15760 415 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 SOWAHCQ53LP3 525 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-210ENST00000532935 SPANXN3Q5MJ09 141 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 KIAA1614Q5VZ46 1190 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 PWWP2BQ6NUJ5 590 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 ZNF549Q6P9A3 640 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 C6orf15Q6UXA7 325 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-210ENST00000532935 ZBTB2Q8N680 514 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms