RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 RASSF9O75901 435 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 MATN4O95460 622 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 SEPHS1P49903 392 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 KPNA2P52292 529 aaKnown RBP19.27■□□□□ 0.68
CPSF1-209ENST00000532725 MGAT5Q09328 741 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 GRB7Q14451 532 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 KYNUQ16719 465 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 ARMC6Q6NXE6 501 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 CYS1Q717R9 158 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 SPNS2Q8IVW8 549 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 PALM2Q8IXS6 379 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 SIDT2Q8NBJ9 832 aaKnown RBP19.27■□□□□ 0.68
CPSF1-209ENST00000532725 UBXN4Q92575 508 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 INPP5DQ92835 1189 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 CD180Q99467 661 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 MENTQ9BUN1 341 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 PHACTR1Q9C0D0 580 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 ZDHHC18Q9NUE0 388 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 SLC39A1Q9NY26 324 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 ACSL6Q9UKU0 697 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 PCDHGA3Q9Y5H0 932 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 NFS1Q9Y697 457 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 AHCTF1Q8WYP5 2266 aa19.27■□□□□ 0.68
CPSF1-209ENST00000532725 A0A087WV48 116 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 MATN2O00339 956 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 PRAMEF10O60809 474 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 C1orf105O95561 183 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 RPN2P04844 631 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 NELFEP18615 380 aaKnown RBP19.26■□□□□ 0.67
CPSF1-209ENST00000532725 PRDX3P30048 256 aaKnown RBP19.26■□□□□ 0.67
CPSF1-209ENST00000532725 SHMT2P34897 504 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 GUCY2DQ02846 1103 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 PRKAA1Q13131 559 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 GLE1Q53GS7 698 aaKnown RBP19.26■□□□□ 0.67
CPSF1-209ENST00000532725 DNTTIP2Q5QJE6 756 aaKnown RBP19.26■□□□□ 0.67
CPSF1-209ENST00000532725 CYHR1Q6ZMK1 362 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 FAM129CQ86XR2 697 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 PMEPA1Q969W9 287 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 SLC41A2Q96JW4 573 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 PPM1MQ96MI6 270 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 GPR21Q99679 349 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 SIDT1Q9NXL6 827 aaKnown RBP19.26■□□□□ 0.67
CPSF1-209ENST00000532725 OR6C2Q9NZP2 312 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 FOXJ2Q9P0K8 574 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 POMT2Q9UKY4 750 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 PLAGL1Q9UM63 463 aa19.26■□□□□ 0.67
CPSF1-209ENST00000532725 TLCD2A6NGC4 264 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 CD9P21926 228 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 SSTR1P30872 391 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 PCBP4P57723 403 aaKnown RBP19.25■□□□□ 0.67
CPSF1-209ENST00000532725 KLHL38Q2WGJ6 581 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 RBM20Q5T481 1227 aaKnown RBP19.25■□□□□ 0.67
CPSF1-209ENST00000532725 TMEM164Q5U3C3 297 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 C3orf62Q6ZUJ4 267 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 NEK10Q6ZWH5 1172 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 DCUN1D3Q8IWE4 304 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 CARFQ8N187 725 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 CEP112Q8N8E3 955 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 ZNF248Q8NDW4 579 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 CD200R1Q8TD46 325 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 SKA2Q8WVK7 121 aaPredicted RBP19.25■□□□□ 0.67
CPSF1-209ENST00000532725 NDNQ99608 321 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 DDA1Q9BW61 102 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 RUVBL2Q9Y230 463 aaKnown RBP19.25■□□□□ 0.67
CPSF1-209ENST00000532725 B3GALT1Q9Y5Z6 326 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 PSAT1Q9Y617 370 aa19.25■□□□□ 0.67
CPSF1-209ENST00000532725 LAMA5O15230 3695 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 KDM1AO60341 852 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 VPS26AO75436 327 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 SKIV2L2P42285 1042 aaKnown RBP19.24■□□□□ 0.67
CPSF1-209ENST00000532725 MAGEA4P43358 317 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 ABCG1P45844 678 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 CDKN2DP55273 166 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 RAB15P59190 212 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 GPX6P59796 221 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 SH3BP2P78314 561 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 TTLL9Q3SXZ7 439 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 ANKS6Q68DC2 871 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 FBXO38Q6PIJ6 1188 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 KMT5CQ86Y97 462 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 FLVCR1-AS1Q8TAF5 88 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 RAD51AP1Q96B01 352 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 FOPNLQ96NB1 174 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 ASPSCR1Q9BZE9 553 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 APMAPQ9HDC9 416 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 SMYD2Q9NRG4 433 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 FAM114A2Q9NRY5 505 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 C1GALT1Q9NS00 363 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 SPHK1Q9NYA1 384 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 ACTR10Q9NZ32 417 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 ZFATQ9P243 1243 aa19.24■□□□□ 0.67
CPSF1-209ENST00000532725 PKD1L2Q7Z442 2459 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 PIPSLA2A3N6 862 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 GSAPA4D1B5 854 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 C2orf74A8MZ97 194 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 PSIP1O75475 530 aaKnown RBP19.23■□□□□ 0.67
CPSF1-209ENST00000532725 CHRM5P08912 532 aaPredicted RBP19.23■□□□□ 0.67
CPSF1-209ENST00000532725 GSTA2P09210 222 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 CBSLP0DN79 551 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 PKLRP30613 574 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms