RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SH3KBP1Q96B97 665 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ARMC5Q96C12 935 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 BIRC7Q96CA5 298 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SGTBQ96EQ0 304 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 MND1Q9BWT6 205 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC2A11Q9BYW1 496 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PPIL3Q9H2H8 161 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ALG2Q9H553 416 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 RASSF1Q9NS23 344 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CUEDC1Q9NWM3 386 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 LEF1Q9UJU2 399 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDHB5Q9Y5E4 795 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 DOCK1Q14185 1865 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 WDR90Q96KV7 1748 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 C9IYK1 514 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 E7ESA3 106 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 hCG_2039718K7EN88 272 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ARPC2O15144 300 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 B4GAT1O43505 415 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 SCO2O43819 266 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TULP3O75386 442 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF682O95780 498 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ERBB2P04626 1255 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CTRB1P17538 263 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CYP2A7P20853 494 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ATP5F1P24539 256 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 FMO3P31513 532 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 PTPN7P35236 360 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 GLUD2P49448 558 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 PLK1P53350 603 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CDH13P55290 713 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 DEFA5Q01523 94 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 RIPPLY1Q0D2K3 151 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 SNAPC1Q16533 368 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 NFIL3Q16649 462 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ZSWIM7Q19AV6 140 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 WSCD2Q2TBF2 565 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 INO80DQ53TQ3 878 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 NHSL2Q5HYW2 709 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 RTP2Q5QGT7 225 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CTRB2Q6GPI1 263 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 KCTD20Q7Z5Y7 419 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 SYVN1Q86TM6 617 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 COLGALT1Q8NBJ5 622 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 NDNFQ8TB73 568 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 GANCQ8TET4 914 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CLEC4CQ8WTT0 213 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 AURKBQ96GD4 344 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 PCED1BQ96HM7 432 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 MAGEB10Q96LZ2 347 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 HYLS1Q96M11 299 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CHRAC1Q9NRG0 131 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 OLA1Q9NTK5 396 aaKnown RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF624Q9P2J8 865 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 XPR1Q9UBH6 696 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TPRP12270 2363 aaKnown RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 MEIOCA2RUB1 952 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 AGAP5A6NIR3 686 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 PITPNM1O00562 1244 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 XPNPEP2O43895 674 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 SEC14L2O76054 403 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 PLATP00750 562 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 NCK1P16333 377 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TGM1P22735 817 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CST5P28325 142 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 GABRR2P28476 465 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 MIPP30301 263 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CAPZA2P47755 286 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 LHX1P48742 406 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 GABARAPL2P60520 117 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 MRPS5P82675 430 aaKnown RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 COL19A1Q14993 1142 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 GPAT3Q53EU6 434 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 DGKKQ5KSL6 1271 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ZYG11AQ6WRX3 759 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 SPATC1Q76KD6 591 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 Q7L0L9 218 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 LYSMD2Q8IV50 215 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TIGD4Q8IY51 512 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TRIM8Q9BZR9 551 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CHMP1AQ9HD42 196 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TM9SF3Q9HD45 589 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TIGARQ9NQ88 270 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TNFRSF10DQ9UBN6 386 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 UBQLN2Q9UHD9 624 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 DNMT3LQ9UJW3 386 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 DUSP12Q9UNI6 340 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 MRPS23Q9Y3D9 190 aaKnown RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 MAB21L2Q9Y586 359 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 PRAMEF33A0A0G2JMD5 474 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 LOC105371267A0A1B0GV96 52 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 FABP12A6NFH5 140 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 UBXN8O00124 270 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 SSNA1O43805 119 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 NOBOXO60393 691 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 PRAMEF10O60809 474 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 SCO1O75880 301 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 KDM4BO94953 1096 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 GLUD1P00367 558 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms