RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 SYTL1Q8IYJ3 562 aa17.52■□□□□ 0.4
SCN4B-205ENST00000531550 CISD2Q8N5K1 135 aaKnown RBP17.52■□□□□ 0.4
SCN4B-205ENST00000531550 BBOF1Q8ND07 529 aa17.52■□□□□ 0.4
SCN4B-205ENST00000531550 CCDC110Q8TBZ0 833 aa17.52■□□□□ 0.4
SCN4B-205ENST00000531550 AGAP3Q96P47 875 aa17.52■□□□□ 0.4
SCN4B-205ENST00000531550 SRPK1Q96SB4 655 aaKnown RBP17.52■□□□□ 0.4
SCN4B-205ENST00000531550 ZCCHC2Q9C0B9 1178 aaKnown RBP17.52■□□□□ 0.4
SCN4B-205ENST00000531550 SLC25A51Q9H1U9 297 aa17.52■□□□□ 0.4
SCN4B-205ENST00000531550 FAM114A2Q9NRY5 505 aa17.52■□□□□ 0.4
SCN4B-205ENST00000531550 PCMTD2Q9NV79 361 aa17.52■□□□□ 0.4
SCN4B-205ENST00000531550 KLHL8Q9P2G9 620 aaPredicted RBP17.52■□□□□ 0.4
SCN4B-205ENST00000531550 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.52■□□□□ 0.4
SCN4B-205ENST00000531550 V9GYY5 206 aaPredicted RBP17.52■□□□□ 0.4
SCN4B-205ENST00000531550 GPR39O43194 453 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 NDST3O95803 873 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 MT-CYBP00156 380 aaPredicted RBP17.51■□□□□ 0.39
SCN4B-205ENST00000531550 PBLDP30039 288 aaPredicted RBP17.51■□□□□ 0.39
SCN4B-205ENST00000531550 FDFT1P37268 417 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 RPL21P46778 160 aaKnown RBP17.51■□□□□ 0.39
SCN4B-205ENST00000531550 GPS1Q13098 491 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 NCF4Q15080 339 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 PARP6Q2NL67 630 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 TMEM220Q6QAJ8 160 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 ARHGEF18Q6ZSZ5 1173 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 PCGF5Q86SE9 256 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 EIF1ADQ8N9N8 165 aaKnown RBP17.51■□□□□ 0.39
SCN4B-205ENST00000531550 SPATA22Q8NHS9 363 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 SNF8Q96H20 258 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 SGSM3Q96HU1 749 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 INSM2Q96T92 566 aaPredicted RBP17.51■□□□□ 0.39
SCN4B-205ENST00000531550 IL26Q9NPH9 171 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 WHRNQ9P202 907 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 SLC24A2Q9UI40 661 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 B3GNT3Q9Y2A9 372 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 DNMT3AQ9Y6K1 912 aaPredicted RBP17.51■□□□□ 0.39
SCN4B-205ENST00000531550 ABCA12Q86UK0 2595 aa17.51■□□□□ 0.39
SCN4B-205ENST00000531550 CSMD1Q96PZ7 3565 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 OR2AG2A6NM03 316 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 DNALI1O14645 258 aaPredicted RBP17.5■□□□□ 0.39
SCN4B-205ENST00000531550 CD68P34810 354 aaPredicted RBP17.5■□□□□ 0.39
SCN4B-205ENST00000531550 CA5AP35218 305 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 HMGCLP35914 325 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 VPS41P49754 854 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 CUL1Q13616 776 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 ELOAQ14241 798 aaKnown RBP17.5■□□□□ 0.39
SCN4B-205ENST00000531550 KYNUQ16719 465 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 PTCHD3Q3KNS1 767 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 ZNF789Q5FWF6 425 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 LDLRAP1Q5SW96 308 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 WDR93Q6P2C0 686 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 RAB43Q86YS6 212 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 DDHD1Q8NEL9 900 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 OR1L3Q8NH93 324 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 C12orf66Q96MD2 445 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 PPP1R2P1Q96PQ5 205 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 FAM129AQ9BZQ8 928 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 WWP1Q9H0M0 922 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 KIR3DX1Q9H7L2 352 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 ACTR5Q9H9F9 607 aaPredicted RBP17.5■□□□□ 0.39
SCN4B-205ENST00000531550 GLOD4Q9HC38 313 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 SNX24Q9Y343 169 aa17.5■□□□□ 0.39
SCN4B-205ENST00000531550 SLC9B1P1A6NJY1 282 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 TMEM150CB9EJG8 249 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 F5H423 210 aaPredicted RBP17.49■□□□□ 0.39
SCN4B-205ENST00000531550 SMAPO00193 183 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 UGT1A9O60656 530 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 METTL18O95568 372 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 UGT1A6P19224 532 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 POLR2CP19387 275 aaPredicted RBP17.49■□□□□ 0.39
SCN4B-205ENST00000531550 CYP2A7P20853 494 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 CDH3P22223 829 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 UGT1A1P22309 533 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 UGT1A4P22310 534 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 MCM3P25205 808 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 ELAVL4P26378 380 aaKnown RBP17.49■□□□□ 0.39
SCN4B-205ENST00000531550 SPAM1P38567 509 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 MAGEA6P43360 314 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 NAA30Q147X3 362 aaPredicted RBP17.49■□□□□ 0.39
SCN4B-205ENST00000531550 METRNLQ641Q3 311 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 MRGPREQ86SM8 312 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 KLHDC8BQ8IXV7 354 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 DTX3LQ8TDB6 740 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 ZFPM2Q8WW38 1151 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 FCRL5Q96RD9 977 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 TRIM31Q9BZY9 425 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 ILKAPQ9H0C8 392 aaPredicted RBP17.49■□□□□ 0.39
SCN4B-205ENST00000531550 GBA3Q9H227 469 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 DPH5Q9H2P9 285 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 UGT1A7Q9HAW7 530 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 UGT1A10Q9HAW8 530 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 UGT1A8Q9HAW9 530 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 ETNK1Q9HBU6 452 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 RAB6BQ9NRW1 208 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 POMT2Q9UKY4 750 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 RAB21Q9UL25 225 aa17.49■□□□□ 0.39
SCN4B-205ENST00000531550 PMPCBO75439 489 aa17.48■□□□□ 0.39
SCN4B-205ENST00000531550 SEC31AO94979 1220 aaKnown RBP17.48■□□□□ 0.39
SCN4B-205ENST00000531550 HLA-DPA1P20036 260 aa17.48■□□□□ 0.39
SCN4B-205ENST00000531550 POU3F2P20265 443 aaPredicted RBP17.48■□□□□ 0.39
SCN4B-205ENST00000531550 OTX2P32243 289 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms