RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 KPNA5O15131 536 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 SLC16A5O15375 505 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 EFCAB14O75071 495 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 HIST1H2AGP0C0S8 130 aaPredicted RBP16.83■□□□□ 0.28
BRCA2-204ENST00000530893 SPATA31D3P0C874 917 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 MPC1LP0DKB6 136 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 HIST1H2ADP20671 130 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 AOAHP28039 575 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 HLA-FP30511 346 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 CCR7P32248 378 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 B4GALNT1Q00973 533 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 CYP4F3Q08477 520 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 USP39Q53GS9 565 aaKnown RBP16.83■□□□□ 0.28
BRCA2-204ENST00000530893 CARD16Q5EG05 197 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 AP1ARQ63HQ0 302 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 SPATA31D4Q6ZUB0 917 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 USP51Q70EK9 711 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 MAGEE2Q8TD90 523 aaPredicted RBP16.83■□□□□ 0.28
BRCA2-204ENST00000530893 CYGBQ8WWM9 190 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 VPS50Q96JG6 964 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 HIST1H2AHQ96KK5 128 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 HIST1H2AJQ99878 128 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 H2AFJQ9BTM1 129 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 ZBP1Q9H171 429 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 PIF1Q9H611 641 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 ACTR8Q9H981 624 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 SNX6Q9UNH7 406 aa16.83■□□□□ 0.28
BRCA2-204ENST00000530893 PABPN1LA6NDY0 278 aaKnown RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 ZNF701M0R085 212 aaPredicted RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 ERN1O75460 977 aaKnown RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 CTSAP10619 480 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 PRPS2P11908 318 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 BMP1P13497 986 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 ACPPP15309 386 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 NELFEP18615 380 aaKnown RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 STK19P49842 368 aaPredicted RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 HMGCS1Q01581 520 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 PLEKHS1Q5SXH7 462 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 FAM117BQ6P1L5 589 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 UBE2R2Q712K3 238 aaPredicted RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 HS6ST3Q8IZP7 471 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 CMTM8Q8IZV2 173 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 ZNF548Q8NEK5 533 aaPredicted RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 RDH12Q96NR8 316 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 RNF208Q9H0X6 261 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 TIMMDC1Q9NPL8 285 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 PDE10AQ9Y233 779 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 TMED5Q9Y3A6 229 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 HELZP42694 1942 aaKnown RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 GSTA4O15217 222 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 DFNA5O60443 496 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 SCELO95171 688 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 HPRP00739 348 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 ASLP04424 464 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 LHCGRP22888 699 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 NFKBIAP25963 317 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 MAPK1P28482 360 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 CTSOP43234 321 aaPredicted RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 SPINT3P49223 89 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 ALDH3A2P51648 485 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 DEFB103AP81534 67 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 RUNDC3AQ59EK9 446 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 SPANXN4Q5MJ08 99 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 PLPP6Q8IY26 295 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 ASB11Q8WXH4 323 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 THUMPD3Q9BV44 507 aaKnown RBP16.82■□□□□ 0.28
BRCA2-204ENST00000530893 BRD9Q9H8M2 597 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 ZFP14Q9HCL3 533 aa16.82■□□□□ 0.28
BRCA2-204ENST00000530893 A0A1W2PRU2 124 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 ELOVL7A1L3X0 281 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 SERTM1A2A2V5 107 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 TRMUO75648 421 aaKnown RBP16.81■□□□□ 0.28
BRCA2-204ENST00000530893 BCKDHAP12694 445 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 ZNF30P17039 623 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 EPORP19235 508 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 TTKP33981 857 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 SOX11P35716 441 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 HNRNPFP52597 415 aaKnown RBP16.81■□□□□ 0.28
BRCA2-204ENST00000530893 ARSFP54793 590 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 AP1S2P56377 157 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 CLDN8P56748 225 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 ADARB1P78563 741 aaKnown RBP16.81■□□□□ 0.28
BRCA2-204ENST00000530893 BOP1Q14137 746 aaKnown RBP16.81■□□□□ 0.28
BRCA2-204ENST00000530893 AAK1Q2M2I8 961 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 ATG9BQ674R7 924 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 LILRA6Q6PI73 481 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 NEK10Q6ZWH5 1172 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 ERI1Q8IV48 349 aaKnown RBP16.81■□□□□ 0.28
BRCA2-204ENST00000530893 L3MBTL4Q8NA19 623 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 PNPT1Q8TCS8 783 aaKnown RBP16.81■□□□□ 0.28
BRCA2-204ENST00000530893 OR52E6Q96RD3 313 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 SLC46A2Q9BY10 475 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 ACPTQ9BZG2 426 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 NTN4Q9HB63 628 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 ASAH2Q9NR71 780 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 TMEM39AQ9NV64 488 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 PKD2L2Q9NZM6 624 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 MAN2B2Q9Y2E5 1009 aa16.81■□□□□ 0.28
BRCA2-204ENST00000530893 TRBV5-3A0A0A0MS03 114 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms