RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 YY2O15391 372 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 SMIM24O75264 130 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 PSIP1O75475 530 aaKnown RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 CATP04040 527 aaKnown RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 S100BP04271 92 aaPredicted RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 C8GP07360 202 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 MYF5P13349 255 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 F3P13726 295 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 MTHFD2P13995 350 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 CYP2A7P20853 494 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 MAP4P27816 1152 aaKnown RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 HALP42357 657 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 HNRNPKP61978 463 aaKnown RBP eCLIP10.37□□□□□ -0.75
SOX6-213ENST00000530378 ELOCQ15369 112 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 ZYG11AQ6WRX3 759 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 NEK10Q6ZWH5 1172 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 FBXO39Q8N4B4 442 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 CCNYL1Q8N7R7 359 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 ZDHHC1Q8WTX9 485 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 XKR8Q9H6D3 395 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 PARVBQ9HBI1 364 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 CAPN10Q9HC96 672 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 NCKIPSDQ9NZQ3 722 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 ZNF624Q9P2J8 865 aaPredicted RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 SPASTQ9UBP0 616 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 OARD1Q9Y530 152 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 ZFHX2Q9C0A1 2572 aaPredicted RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 A6NCN8 305 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 C1orf105O95561 183 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 BPGMP07738 259 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 DHRS4L1P0CG22 281 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 MTHFD1P11586 935 aaKnown RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 TSPAN8P19075 237 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 TAC1P20366 129 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 GDF5P43026 501 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 RPIAP49247 311 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 ARRB1P49407 418 aaPredicted RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 MAZP56270 477 aaKnown RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 PLOD1Q02809 727 aaPredicted RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 SP140Q13342 867 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 CHI3L2Q15782 390 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 CES4AQ5XG92 561 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 CAPRIN2Q6IMN6 1127 aaKnown RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 LCA5Q86VQ0 697 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 NUDCD3Q8IVD9 361 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 TRIM48Q8IWZ4 208 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 CNPY4Q8N129 248 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 NAGSQ8N159 534 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 ARFGAP2Q8N6H7 521 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 PPP1R14CQ8TAE6 165 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 RHEBL1Q8TAI7 183 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 SLC37A2Q8TED4 501 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 PYCR2Q96C36 320 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 CXorf40BQ96DE9 158 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 TMEM237Q96Q45 408 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 PKP4Q99569 1192 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 SLC12A9Q9BXP2 914 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 SHCBP1LQ9BZQ2 653 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 ATG10Q9H0Y0 220 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 TRIT1Q9H3H1 467 aaKnown RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 CNOT10Q9H9A5 744 aaKnown RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 WWOXQ9NZC7 414 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 NUDT4Q9NZJ9 180 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 SLC6A14Q9UN76 642 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 PCM1Q15154 2024 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 ASCC3Q8N3C0 2202 aaKnown RBP10.36□□□□□ -0.75
SOX6-213ENST00000530378 SYCE1LA8MT33 242 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 GFYI3L273 518 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 ANXA6P08133 673 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 HIST1H2AGP0C0S8 130 aaPredicted RBP10.36□□□□□ -0.75
SOX6-213ENST00000530378 ENGP17813 658 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 HIST1H2ADP20671 130 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 EPHA8P29322 1005 aaPredicted RBP10.36□□□□□ -0.75
SOX6-213ENST00000530378 EEF1DP29692 281 aaKnown RBP10.36□□□□□ -0.75
SOX6-213ENST00000530378 HSPA7P48741 367 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 SF3A2Q15428 464 aaKnown RBP10.36□□□□□ -0.75
SOX6-213ENST00000530378 UNC5DQ6UXZ4 953 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 PRR23CQ6ZRP0 262 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 GKN2Q86XP6 184 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 DCUN1D3Q8IWE4 304 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 SLC25A45Q8N413 288 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 KYQ8NBH2 561 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 OR5K2Q8NHB8 316 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 MCOLN3Q8TDD5 553 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 MED8Q96G25 268 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 HIST1H2AHQ96KK5 128 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 NSUN5Q96P11 429 aaKnown RBP10.36□□□□□ -0.75
SOX6-213ENST00000530378 HIST1H2AJQ99878 128 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 H2AFJQ9BTM1 129 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 ZNF395Q9H8N7 513 aaPredicted RBP10.36□□□□□ -0.75
SOX6-213ENST00000530378 OXSMQ9NWU1 459 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 RP1P56715 2156 aa10.36□□□□□ -0.75
SOX6-213ENST00000530378 RIF1Q5UIP0 2472 aaKnown RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 KLHL33A6NCF5 533 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 ARHGAP33O14559 1287 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 TAPBPO15533 448 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 KCNJ13O60928 360 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 LYPLA1O75608 230 aaPredicted RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 SLC16A8O95907 504 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 TPBGLP0DKB5 382 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms