RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SLC41A2Q96JW4 573 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 MAP3K3Q99759 626 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 AARSD1Q9BTE6 412 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 DDA1Q9BW61 102 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 PPANQ9NQ55 473 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 SIDT1Q9NXL6 827 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 MOCS1Q9NZB8 636 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 FOXJ2Q9P0K8 574 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 ICKQ9UPZ9 632 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 TDRKHQ9Y2W6 561 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 EPG5Q9HCE0 2579 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 ZZEF1O43149 2961 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 GSAPA4D1B5 854 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 CTAGE15A4D2H0 777 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 TLCD2A6NGC4 264 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 MATN2O00339 956 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 KDM1AO60341 852 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 MATN4O95460 622 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 RPN2P04844 631 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 CTAGE8P0CG41 777 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 NELFEP18615 380 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 PRDX3P30048 256 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 RAB15P59190 212 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 GRB7Q14451 532 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 DCAF12Q5T6F0 453 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 ANKS6Q68DC2 871 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 ZDHHC24Q6UX98 284 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 LRRC69Q6ZNQ3 347 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 CTAGE6Q86UF2 777 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 KMT5CQ86Y97 462 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 CTAGE4Q8IX94 777 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 CARFQ8N187 725 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 SIDT2Q8NBJ9 832 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 SEC14L1Q92503 715 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 INPP5DQ92835 1189 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 PMEPA1Q969W9 287 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 FOPNLQ96NB1 174 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 SLC30A3Q99726 388 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 ASPSCR1Q9BZE9 553 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 DPH1Q9BZG8 443 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 TWSG1Q9GZX9 223 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 SAYSD1Q9NPB0 183 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 OR6C2Q9NZP2 312 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 POMT2Q9UKY4 750 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 DHRS7Q9Y394 339 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 B3GALT1Q9Y5Z6 326 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 NFS1Q9Y697 457 aa12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 ANKRD11Q6UB99 2663 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-216ENST00000529856 ESYT3A0FGR9 886 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 C2orf74A8MZ97 194 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 POLR1CO15160 346 aaPredicted RBP12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 VPS26AO75436 327 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 C1orf105O95561 183 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 CHRM5P08912 532 aaPredicted RBP12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 CD82P27701 267 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 PKLRP30613 574 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 SH3BP2P78314 561 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 TIAL1Q01085 375 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 MGAT5Q09328 741 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 KLHL38Q2WGJ6 581 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 TTLL9Q3SXZ7 439 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 TTC23LQ6PF05 361 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 CEACAM20Q6UY09 585 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 NEK10Q6ZWH5 1172 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 ZFAND4Q86XD8 727 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 DCUN1D3Q8IWE4 304 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 PALM2Q8IXS6 379 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 NOA1Q8NC60 698 aaKnown RBP12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 GIMAP7Q8NHV1 300 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 CD200R1Q8TD46 325 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 SKA2Q8WVK7 121 aaPredicted RBP12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 KCNE4Q8WWG9 221 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 NAF1Q96HR8 494 aaKnown RBP12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 PPM1MQ96MI6 270 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 TEFMQ96QE5 360 aaKnown RBP12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 GPR21Q99679 349 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 CTRCQ99895 268 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 ZPBPQ9BS86 351 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 MENTQ9BUN1 341 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 APMAPQ9HDC9 416 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 C1GALT1Q9NS00 363 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 ACTR10Q9NZ32 417 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 SLC17A6Q9P2U8 582 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 PLAGL1Q9UM63 463 aa12.28□□□□□ -0.44
CCDC90B-216ENST00000529856 KMT2BQ9UMN6 2715 aaPredicted RBP12.27□□□□□ -0.44
CCDC90B-216ENST00000529856 PIPSLA2A3N6 862 aa12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 SLC9B1P1A6NJY1 282 aa12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 ZBTB11O95625 1053 aaPredicted RBP12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 CBSLP0DN79 551 aa12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 CD9P21926 228 aa12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 CDH3P22223 829 aa12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 ITPKBP27987 946 aa12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 SSTR1P30872 391 aa12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 CBSP35520 551 aa12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 CCNFP41002 786 aa12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 SKIV2L2P42285 1042 aaKnown RBP12.27□□□□□ -0.45
CCDC90B-216ENST00000529856 RAB28P51157 221 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms