RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 SCAMP5Q8TAC9 235 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 ARRDC2Q8TBH0 407 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 CCDC177Q9NQR7 707 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-214ENST00000528165 SLC25A37Q9NYZ2 338 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 RNF6Q9Y252 685 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 AP3M1Q9Y2T2 418 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 FGF1P05230 155 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 CTSKP43235 329 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 HK3P52790 923 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 RPL38P63173 70 aaKnown RBP14.37□□□□□ -0.11
CAPN1-214ENST00000528165 ARTNQ5T4W7 220 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 ZNF544Q6NX49 715 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 MSANTD2Q6P1R3 559 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 SPATC1Q76KD6 591 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 TSPYL5Q86VY4 417 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-214ENST00000528165 MSRB3Q8IXL7 192 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 BRSK1Q8TDC3 778 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 PPP1R13LQ8WUF5 828 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 TMEM40Q8WWA1 233 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 FCGR1BQ92637 280 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 POP5Q969H6 163 aaKnown RBP14.37□□□□□ -0.11
CAPN1-214ENST00000528165 PSMG2Q969U7 264 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 FAM120BQ96EK7 910 aaKnown RBP14.37□□□□□ -0.11
CAPN1-214ENST00000528165 SNX18Q96RF0 628 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 GABARAPL1Q9H0R8 117 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 ABCC13Q9NSE7 274 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 FNIP2Q9P278 1114 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 DKK3Q9UBP4 350 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 KCNH4Q9UQ05 1017 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 CAB39Q9Y376 341 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-214ENST00000528165 RRN3P2A6NIE6 340 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 ARVCFO00192 962 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 ZW10O43264 779 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 HLA-DPA1P20036 260 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 PCSK1P29120 753 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 GGT5P36269 586 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 OR2B6P58173 313 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 RUNDC3AQ59EK9 446 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 KDM4DQ6B0I6 523 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 CEP68Q76N32 757 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 UMODL1-AS1Q8N2C9 162 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 CDKN2AIPNLQ96HQ2 116 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 DPY30Q9C005 99 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 NPAP1Q9NZP6 1156 aa14.37□□□□□ -0.11
CAPN1-214ENST00000528165 SCO2O43819 266 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 VPS26AO75436 327 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 CNPP09543 421 aaKnown RBP14.36□□□□□ -0.11
CAPN1-214ENST00000528165 IL1RNP18510 177 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 ITGB6P18564 788 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 GADD45AP24522 165 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 PROX2Q3B8N5 592 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 GTDC1Q4AE62 458 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 CARD16Q5EG05 197 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 SPANXN4Q5MJ08 99 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 ATAD3CQ5T2N8 411 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 PPP2R2DQ66LE6 453 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 OR6F1Q8NGZ6 308 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 EMID1Q96A84 441 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-214ENST00000528165 PDLIM5Q96HC4 596 aaKnown RBP14.36□□□□□ -0.11
CAPN1-214ENST00000528165 PPP3R2Q96LZ3 170 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 SEMA3CQ99985 751 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 NUAK2Q9H093 628 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 KIF17Q9P2E2 1029 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 NDRG4Q9ULP0 352 aaKnown RBP14.36□□□□□ -0.11
CAPN1-214ENST00000528165 WBP11Q9Y2W2 641 aaKnown RBP14.36□□□□□ -0.11
CAPN1-214ENST00000528165 PCDHGB6Q9Y5F9 930 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 WASH4PA8MWX3 477 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 FAM220BPB1ANY3 271 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 PGRP06401 933 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 EFNA1P20827 205 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-214ENST00000528165 PAX3P23760 479 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 MLLT6P55198 1093 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-214ENST00000528165 ABRAXAS2Q15018 415 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 PTPRNQ16849 979 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 ATG9BQ674R7 924 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 OR2T5Q6IEZ7 315 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 TTC23LQ6PF05 361 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 AGMOQ6ZNB7 445 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 PGBD5Q8N414 524 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 KBTBD8Q8NFY9 601 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 OR2T29Q8NH02 315 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 TM9SF3Q9HD45 589 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 C1orf109Q9NX04 203 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 EHD3Q9NZN3 535 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 RAPGEFL1Q9UHV5 662 aa14.36□□□□□ -0.11
CAPN1-214ENST00000528165 TRMT6Q9UJA5 497 aaKnown RBP14.36□□□□□ -0.11
CAPN1-214ENST00000528165 EVPLLA8MZ36 301 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 KMOO15229 486 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 GJB3O75712 270 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 ZNF682O95780 498 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 IL6P05231 212 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 SERPINF2P08697 491 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 IL2P60568 153 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 ZFP69Q49AA0 526 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 KIAA1614Q5VZ46 1190 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 GATAD2AQ86YP4 633 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 SIDT2Q8NBJ9 832 aaKnown RBP14.35□□□□□ -0.11
CAPN1-214ENST00000528165 OR4F6Q8NGB9 312 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 FATE1Q969F0 183 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 TADA1Q96BN2 335 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms