RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 PTRH2Q9Y3E5 179 aaKnown RBP22.77■■□□□ 1.24
CPSF1-202ENST00000527827 AP1M2Q9Y6Q5 423 aa22.77■■□□□ 1.24
CPSF1-202ENST00000527827 MASP2O00187 686 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 CNOT3O75175 753 aaKnown RBP22.76■■□□□ 1.23
CPSF1-202ENST00000527827 OR2B3O76000 313 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 UGT2B7P16662 529 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 DCTP40126 519 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 MAGEA1P43355 309 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 FOXL2P58012 376 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 ZRANB3Q5FWF4 1079 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 CCDC181Q5TID7 509 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 ZNF449Q6P9G9 518 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 UNC5AQ6ZN44 842 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 CDKL3Q8IVW4 592 aaPredicted RBP22.76■■□□□ 1.23
CPSF1-202ENST00000527827 TMEM151BQ8IW70 566 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 KLHDC8BQ8IXV7 354 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 CLEC1AQ8NC01 280 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 OR5AR1Q8NGP9 310 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 FLVCR1-AS1Q8TAF5 88 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 INPP5DQ92835 1189 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.76■■□□□ 1.23
CPSF1-202ENST00000527827 SPATA13Q96N96 652 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 FAM118BQ9BPY3 351 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 FERMT1Q9BQL6 677 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 CHRNA10Q9GZZ6 450 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 SPHK1Q9NYA1 384 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 CDYLQ9Y232 598 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 NUP210LQ5VU65 1888 aa22.76■■□□□ 1.23
CPSF1-202ENST00000527827 H7C0S8 307 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 KCNN4O15554 427 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 TPBGLP0DKB5 382 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 RBP3P10745 1247 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 FOLR3P41439 243 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 COPS2P61201 443 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 HOOK3Q86VS8 718 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 PIANPQ8IYJ0 282 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 OR2Y1Q8NGV0 311 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 N4BP2L2Q92802 583 aaPredicted RBP22.75■■□□□ 1.23
CPSF1-202ENST00000527827 P4HTMQ9NXG6 502 aa22.75■■□□□ 1.23
CPSF1-202ENST00000527827 DHCR7Q9UBM7 475 aaKnown RBP22.75■■□□□ 1.23
CPSF1-202ENST00000527827 GPN3Q9UHW5 284 aaPredicted RBP22.75■■□□□ 1.23
CPSF1-202ENST00000527827 DOCK10Q96BY6 2186 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 POLEQ07864 2286 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 PEX12O00623 359 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 PJA2O43164 708 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 ALPPP05187 535 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 ATXN8OSP0DMR3 200 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 EIF3EP60228 445 aaKnown RBP22.74■■□□□ 1.23
CPSF1-202ENST00000527827 DCDP81605 110 aaKnown RBP22.74■■□□□ 1.23
CPSF1-202ENST00000527827 LYPLAL1Q5VWZ2 237 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 TAS2R42Q7RTR8 314 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 PPP1R32Q7Z5V6 425 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 CNGA4Q8IV77 575 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 PROKR1Q8TCW9 393 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 BARD1Q99728 777 aaKnown RBP22.74■■□□□ 1.23
CPSF1-202ENST00000527827 ZBTB20Q9HC78 741 aaPredicted RBP22.74■■□□□ 1.23
CPSF1-202ENST00000527827 NLE1Q9NVX2 485 aaPredicted RBP22.74■■□□□ 1.23
CPSF1-202ENST00000527827 IFT80Q9P2H3 777 aaPredicted RBP22.74■■□□□ 1.23
CPSF1-202ENST00000527827 FEZ2Q9UHY8 353 aaPredicted RBP22.74■■□□□ 1.23
CPSF1-202ENST00000527827 SLC5A6Q9Y289 635 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 EFR3BQ9Y2G0 817 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 PRSS21Q9Y6M0 314 aa22.74■■□□□ 1.23
CPSF1-202ENST00000527827 MACROD2A1Z1Q3 448 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 ANKUB1A6NFN9 424 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 AKR1B15C9JRZ8 316 aaPredicted RBP22.73■■□□□ 1.23
CPSF1-202ENST00000527827 IGHEP01854 428 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 UMODP07911 640 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 CHRM5P08912 532 aaPredicted RBP22.73■■□□□ 1.23
CPSF1-202ENST00000527827 GSTM1P09488 218 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 ACADLP28330 430 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 SHMT2P34897 504 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 SOX8P57073 446 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 GSTM4Q03013 218 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 TBX2Q13207 712 aaPredicted RBP22.73■■□□□ 1.23
CPSF1-202ENST00000527827 SLC9A5Q14940 896 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 DBN1Q16643 649 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 MRPL14Q6P1L8 145 aaKnown RBP22.73■■□□□ 1.23
CPSF1-202ENST00000527827 DARS2Q6PI48 645 aaKnown RBP22.73■■□□□ 1.23
CPSF1-202ENST00000527827 ZNF655Q8N720 491 aaPredicted RBP22.73■■□□□ 1.23
CPSF1-202ENST00000527827 PTERQ96BW5 349 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 OSBPL8Q9BZF1 889 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 ILKAPQ9H0C8 392 aaPredicted RBP22.73■■□□□ 1.23
CPSF1-202ENST00000527827 NDOR1Q9UHB4 597 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 NTNG1Q9Y2I2 539 aa22.73■■□□□ 1.23
CPSF1-202ENST00000527827 A0A0J9YY10 115 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 ZSCAN9O15535 394 aaPredicted RBP22.72■■□□□ 1.23
CPSF1-202ENST00000527827 STK10O94804 968 aaKnown RBP22.72■■□□□ 1.23
CPSF1-202ENST00000527827 AP2A2O94973 939 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 CD63P08962 238 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 CTNNA1P35221 906 aaKnown RBP22.72■■□□□ 1.23
CPSF1-202ENST00000527827 NKAIN1Q4KMZ8 207 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 KCTD11Q693B1 232 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 Q6ZS92 163 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 TBC1D21Q8IYX1 336 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 DNAJC22Q8N4W6 341 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 CDKN2AIPNLQ96HQ2 116 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 C5orf34Q96MH7 638 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 PPP1R2P1Q96PQ5 205 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 AP1M1Q9BXS5 423 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 ASF1AQ9Y294 204 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms