RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 GDPD4Q6W3E5 623 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 NEK10Q6ZWH5 1172 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 RIMKLAQ8IXN7 391 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 LIX1Q8N485 282 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 LEMD2Q8NC56 503 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 ASB11Q8WXH4 323 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 HIST1H2AHQ96KK5 128 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 HIST1H2AJQ99878 128 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 H2AFJQ9BTM1 129 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 GORASP2Q9H8Y8 452 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 FARSBQ9NSD9 589 aaKnown RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 PABPN1LA6NDY0 278 aaKnown RBP15□□□□□ -0.01
USH1C-207ENST00000527720 SOBPA7XYQ1 873 aa15□□□□□ -0.01
USH1C-207ENST00000527720 NPIPB8E9PQR5 432 aa15□□□□□ -0.01
USH1C-207ENST00000527720 PGRP06401 933 aa15□□□□□ -0.01
USH1C-207ENST00000527720 ATP1B2P14415 290 aaPredicted RBP15□□□□□ -0.01
USH1C-207ENST00000527720 MTPNP58546 118 aa15□□□□□ -0.01
USH1C-207ENST00000527720 DCDC1P59894 354 aa15□□□□□ -0.01
USH1C-207ENST00000527720 HMGCS1Q01581 520 aa15□□□□□ -0.01
USH1C-207ENST00000527720 FAM174BQ3ZCQ3 159 aa15□□□□□ -0.01
USH1C-207ENST00000527720 ASTLQ6HA08 431 aaPredicted RBP15□□□□□ -0.01
USH1C-207ENST00000527720 ISLR2Q6UXK2 745 aa15□□□□□ -0.01
USH1C-207ENST00000527720 FKBP9P1Q75LS8 142 aa15□□□□□ -0.01
USH1C-207ENST00000527720 RTL10Q7L3V2 364 aa15□□□□□ -0.01
USH1C-207ENST00000527720 RALGPS2Q86X27 583 aaPredicted RBP15□□□□□ -0.01
USH1C-207ENST00000527720 TMEM25Q86YD3 366 aa15□□□□□ -0.01
USH1C-207ENST00000527720 DTWD1Q8N5C7 304 aa15□□□□□ -0.01
USH1C-207ENST00000527720 FAM47BQ8NA70 645 aa15□□□□□ -0.01
USH1C-207ENST00000527720 OR52E4Q8NGH9 312 aa15□□□□□ -0.01
USH1C-207ENST00000527720 ZNF583Q96ND8 569 aa15□□□□□ -0.01
USH1C-207ENST00000527720 OSBPL6Q9BZF3 934 aa15□□□□□ -0.01
USH1C-207ENST00000527720 SMG9Q9H0W8 520 aaKnown RBP15□□□□□ -0.01
USH1C-207ENST00000527720 ACTR8Q9H981 624 aa15□□□□□ -0.01
USH1C-207ENST00000527720 SNX6Q9UNH7 406 aa15□□□□□ -0.01
USH1C-207ENST00000527720 IRAK3Q9Y616 596 aa15□□□□□ -0.01
USH1C-207ENST00000527720 MYOCOSA0A1B0GUC4 107 aa15□□□□□ -0.01
USH1C-207ENST00000527720 SERTM1A2A2V5 107 aa15□□□□□ -0.01
USH1C-207ENST00000527720 CCL16O15467 120 aa15□□□□□ -0.01
USH1C-207ENST00000527720 LINC00271P0C7V0 271 aa15□□□□□ -0.01
USH1C-207ENST00000527720 RAP2AP10114 183 aa15□□□□□ -0.01
USH1C-207ENST00000527720 EPORP19235 508 aa15□□□□□ -0.01
USH1C-207ENST00000527720 NFKBIAP25963 317 aa15□□□□□ -0.01
USH1C-207ENST00000527720 SLC6A12P48065 614 aa15□□□□□ -0.01
USH1C-207ENST00000527720 AP1S2P56377 157 aa15□□□□□ -0.01
USH1C-207ENST00000527720 SEMG2Q02383 582 aa15□□□□□ -0.01
USH1C-207ENST00000527720 SELPLGQ14242 412 aa15□□□□□ -0.01
USH1C-207ENST00000527720 FAM98BQ52LJ0 330 aaKnown RBP15□□□□□ -0.01
USH1C-207ENST00000527720 ELMSAN1Q6PJG2 1045 aa15□□□□□ -0.01
USH1C-207ENST00000527720 MBOAT1Q6ZNC8 495 aa15□□□□□ -0.01
USH1C-207ENST00000527720 TRIML2Q8N7C3 387 aa15□□□□□ -0.01
USH1C-207ENST00000527720 POP5Q969H6 163 aaKnown RBP15□□□□□ -0.01
USH1C-207ENST00000527720 CHID1Q9BWS9 393 aa15□□□□□ -0.01
USH1C-207ENST00000527720 CAAP1Q9H8G2 361 aa15□□□□□ -0.01
USH1C-207ENST00000527720 RAD18Q9NS91 495 aa15□□□□□ -0.01
USH1C-207ENST00000527720 SMPD3Q9NY59 655 aaPredicted RBP15□□□□□ -0.01
USH1C-207ENST00000527720 VAPAQ9P0L0 249 aa15□□□□□ -0.01
USH1C-207ENST00000527720 USP22Q9UPT9 525 aa15□□□□□ -0.01
USH1C-207ENST00000527720 CCL26Q9Y258 94 aa15□□□□□ -0.01
USH1C-207ENST00000527720 CFAP99D6REC4 459 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 NEDD8-MDP1E9PL57 170 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 GFYI3L273 518 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 PLOD2O00469 737 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 AP2A2O94973 939 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 PRSS23O95084 383 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 PRPS2P11908 318 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 ACPPP15309 386 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 CYP2A7P20853 494 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 CCR2P41597 374 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 RECQLP46063 649 aaPredicted RBP14.99□□□□□ -0.01
USH1C-207ENST00000527720 ALDH3B2P48448 385 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 BOP1Q14137 746 aaKnown RBP14.99□□□□□ -0.01
USH1C-207ENST00000527720 B3GNT6Q6ZMB0 384 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 L3MBTL4Q8NA19 623 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 OR2T12Q8NG77 320 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 ZFP28Q8NHY6 868 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 ITFG1Q8TB96 612 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 IRF7Q92985 503 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 RNF145Q96MT1 663 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 SH3GL3Q99963 347 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 BBS2Q9BXC9 721 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 ZFP14Q9HCL3 533 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 NFKBIL1Q9UBC1 381 aaPredicted RBP14.99□□□□□ -0.01
USH1C-207ENST00000527720 SLCO3A1Q9UIG8 710 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 TMPRSS11EQ9UL52 423 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 TMED5Q9Y3A6 229 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 KCNE1BA0A087WTH5 132 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 TRIM64CA6NLI5 447 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 EI24O14681 340 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 CLOCKO15516 846 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 DEAF1O75398 565 aaPredicted RBP14.99□□□□□ -0.01
USH1C-207ENST00000527720 BMP10O95393 424 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 BCKDHAP12694 445 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 ITGB8P26012 769 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 MAPK1P28482 360 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 VIPR1P32241 457 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 RPS9P46781 194 aaKnown RBP14.99□□□□□ -0.01
USH1C-207ENST00000527720 CLDN8P56748 225 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 CYP4F3Q08477 520 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 HSPA14Q0VDF9 509 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 ARHGAP15Q53QZ3 475 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms