RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 NCF1CA8MVU1 366 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-203ENST00000527275 KLK8O60259 260 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 NCF1P14598 390 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-203ENST00000527275 RABIFP47224 123 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 SH3BP2P78314 561 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 MXRA7P84157 204 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 NAA25Q14CX7 972 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 ANKS6Q68DC2 871 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 LRRTM4Q86VH4 590 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 CLYBLQ8N0X4 340 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 ASZ1Q8WWH4 475 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 LINC00615Q96LM1 132 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-203ENST00000527275 C1orf21Q9H246 121 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 SUFUQ9UMX1 484 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 G3BP2Q9UN86 482 aaKnown RBP18.35■□□□□ 0.53
SMPD1-203ENST00000527275 STX16-NPEPL1H3BU86 382 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 PPP6CO00743 305 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 STX16O14662 325 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 HK3P52790 923 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 TTLL9Q3SXZ7 439 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 LAYNQ6UX15 382 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 VRK3Q8IV63 474 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 CPSF7Q8N684 471 aaKnown RBP18.34■□□□□ 0.53
SMPD1-203ENST00000527275 CEP70Q8NHQ1 597 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 PDXPQ96GD0 296 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 WDR92Q96MX6 357 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 NSUN5Q96P11 429 aaKnown RBP18.34■□□□□ 0.53
SMPD1-203ENST00000527275 MEAF6Q9HAF1 191 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 KLHL42Q9P2K6 505 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 SLC23A2Q9UGH3 650 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 PNMA8BQ9ULN7 279 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-203ENST00000527275 TMCO1Q9UM00 188 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 SPAG17Q6Q759 2223 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 LOC100653049A0A140TA62 436 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 PRSS38A1L453 326 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 SCAMP1O15126 338 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 KPNA5O15131 536 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 SNX2O60749 519 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 KRT34O76011 436 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 THEGLP0DJG4 465 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 KELP23276 732 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 DGKAP23743 735 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 PRDX6P30041 224 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 RGS4P49798 205 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 ZNF658BQ4V348 819 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-203ENST00000527275 FBXO48Q5FWF7 155 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 TMEM198Q66K66 360 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 CLEC6AQ6EIG7 209 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 LPCAT2Q7L5N7 544 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 CHST15Q7LFX5 561 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-203ENST00000527275 CFAP206Q8IYR0 622 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 RGL4Q8IZJ4 473 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 C1orf216Q8TAB5 229 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 TRPC4APQ8TEL6 797 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 GAB3Q8WWW8 586 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 MID1IP1Q9NPA3 183 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 C11orf16Q9NQ32 467 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 CD274Q9NZQ7 290 aa18.34■□□□□ 0.53
SMPD1-203ENST00000527275 TOR1BO14657 336 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 HRO43593 1189 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 GPC4O75487 556 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 FGF4P08620 206 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 PGM1P36871 562 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 RACK1P63244 317 aaKnown RBP18.33■□□□□ 0.52
SMPD1-203ENST00000527275 CLCQ05315 142 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 PYCR3Q53H96 274 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 RD3Q7Z3Z2 195 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 AMZ2Q86W34 360 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 OR2L2Q8NH16 312 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 DNASE2BQ8WZ79 361 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 OR1E3Q8WZA6 343 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 TSACCQ96A04 125 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-203ENST00000527275 KLHDC7BQ96G42 594 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 SCARF2Q96GP6 870 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-203ENST00000527275 CATSPER2Q96P56 530 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 C1QTNF3Q9BXJ4 246 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 RMI1Q9H9A7 625 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 ANKRD12Q6UB98 2062 aa18.33■□□□□ 0.52
SMPD1-203ENST00000527275 C17orf113A0A1B0GUU1 675 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 MGAT4DA6NG13 374 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 TNFRSF10AO00220 468 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 KMOO15229 486 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 COX4I1P13073 169 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 PREPP48147 710 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 INHBCP55103 352 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 NAA20P61599 178 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 NFE2L1Q14494 772 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 GBX1Q14549 363 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 TGFBIQ15582 683 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 DNAL1Q4LDG9 190 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 GALNT13Q8IUC8 556 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 ARHGAP24Q8N264 748 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 ACTRT2Q8TDY3 377 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 TMEM159Q96B96 161 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 MMADHCQ9H3L0 296 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-203ENST00000527275 ZNF385DQ9H6B1 395 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 CARS2Q9HA77 564 aaKnown RBP18.32■□□□□ 0.52
SMPD1-203ENST00000527275 GPR27Q9NS67 375 aa18.32■□□□□ 0.52
SMPD1-203ENST00000527275 UTP6Q9NYH9 597 aaKnown RBP18.32■□□□□ 0.52
SMPD1-203ENST00000527275 SPTY2D1-AS1A0A0U1RR47 76 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms