RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 KLK13Q9UKR3 277 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 TDRKHQ9Y2W6 561 aaKnown RBP12.57□□□□□ -0.4
SMPD1-202ENST00000526280 ENTPD2Q9Y5L3 495 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 IGHV5-10-1A0A0J9YXX1 117 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 TMX2-CTNND1H3BSU7 103 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 RIPK2O43353 540 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 PSIP1O75475 530 aaKnown RBP12.56□□□□□ -0.4
SMPD1-202ENST00000526280 TSPAN12O95859 305 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 C9P02748 559 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 SPINK2P20155 84 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 SAT1P21673 171 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 CCKBRP32239 447 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 CCNFP41002 786 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 CAPZBP47756 277 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 PPM1FP49593 454 aaPredicted RBP12.56□□□□□ -0.4
SMPD1-202ENST00000526280 RGS4P49798 205 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 INHBCP55103 352 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 IL2P60568 153 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 SHC2P98077 582 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 LRRC8EQ6NSJ5 796 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 HDXQ7Z353 690 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 PIWIL4Q7Z3Z4 852 aaKnown RBP12.56□□□□□ -0.4
SMPD1-202ENST00000526280 AMIGO1Q86WK6 493 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 PLXDC1Q8IUK5 500 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 CEP97Q8IW35 865 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 UHMK1Q8TAS1 419 aaKnown RBP12.56□□□□□ -0.4
SMPD1-202ENST00000526280 SLC44A1Q8WWI5 657 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 NRTNQ99748 197 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 SRMSQ9H3Y6 488 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 POPDC3Q9HBV1 291 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 HRASLS2Q9NWW9 162 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 TMEM9Q9P0T7 183 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 EPHA6Q9UF33 1036 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 TSR3Q9UJK0 312 aaKnown RBP12.56□□□□□ -0.4
SMPD1-202ENST00000526280 SLC39A10Q9ULF5 831 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 ICKQ9UPZ9 632 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 NEUROG3Q9Y4Z2 214 aa12.56□□□□□ -0.4
SMPD1-202ENST00000526280 OR6C74A6NCV1 312 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 OR5K3A6NET4 321 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 GFYI3L273 518 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 CAPN5O15484 640 aaPredicted RBP12.55□□□□□ -0.4
SMPD1-202ENST00000526280 KDM1AO60341 852 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 SASH3O75995 380 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 ITGA2BP08514 1039 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 MPSTP25325 297 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 SHMT2P34897 504 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 BDKRB1P46663 353 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 SLC12A2P55011 1212 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 GFERP55789 205 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 GRB7Q14451 532 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 SLC29A2Q14542 456 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 USP10Q14694 798 aaKnown RBP12.55□□□□□ -0.4
SMPD1-202ENST00000526280 CCSMST1Q4G0I0 132 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 TTC23LQ6PF05 361 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 TMEM207Q6UWW9 146 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 OOSP2Q86WS3 158 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 MAGEC3Q8TD91 643 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 RAD51AP1Q96B01 352 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 MRRFQ96E11 262 aaKnown RBP12.55□□□□□ -0.4
SMPD1-202ENST00000526280 LINGO1Q96FE5 620 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 ZDHHC12Q96GR4 267 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 PDLIM5Q96HC4 596 aaKnown RBP12.55□□□□□ -0.4
SMPD1-202ENST00000526280 MENTQ9BUN1 341 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 EPB41L4BQ9H329 900 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 XKR8Q9H6D3 395 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 CAB39LQ9H9S4 337 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 MSRB2Q9Y3D2 182 aa12.55□□□□□ -0.4
SMPD1-202ENST00000526280 MN1Q10571 1320 aaPredicted RBP12.55□□□□□ -0.4
SMPD1-202ENST00000526280 KIF26BQ2KJY2 2108 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 HMX2A2RU54 273 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 ARHGEF33A8MVX0 844 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 BTN3A3O00478 584 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 MAP2K7O14733 419 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 WISP3O95389 354 aaPredicted RBP12.54□□□□□ -0.4
SMPD1-202ENST00000526280 CATP04040 527 aaKnown RBP12.54□□□□□ -0.4
SMPD1-202ENST00000526280 THRAP10827 490 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 ZNF37AP17032 561 aaPredicted RBP12.54□□□□□ -0.4
SMPD1-202ENST00000526280 POLR2CP19387 275 aaPredicted RBP12.54□□□□□ -0.4
SMPD1-202ENST00000526280 RAB28P51157 221 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 TRA2AQ13595 282 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMPD1-202ENST00000526280 ZNF460Q14592 562 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 ZKSCAN8Q15776 578 aaPredicted RBP12.54□□□□□ -0.4
SMPD1-202ENST00000526280 PHF19Q5T6S3 580 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 ARHGAP22Q7Z5H3 698 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 ADGRF3Q8IZF5 1079 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 MYO1HQ8N1T3 1032 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 FBXO15Q8NCQ5 510 aaPredicted RBP12.54□□□□□ -0.4
SMPD1-202ENST00000526280 TSPAN17Q96FV3 270 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 LIN37Q96GY3 246 aaPredicted RBP12.54□□□□□ -0.4
SMPD1-202ENST00000526280 CCDC74BQ96LY2 380 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 TGM7Q96PF1 710 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 PAFAH2Q99487 392 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 STRADBQ9C0K7 418 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 TWSG1Q9GZX9 223 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 ZMYND15Q9H091 742 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 SYTL2Q9HCH5 934 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 OR6C2Q9NZP2 312 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 CIDEBQ9UHD4 219 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 ANGPTL2Q9UKU9 493 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 567.1 ms