RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 IARS2Q9NSE4 1012 aaKnown RBP9.89□□□□□ -0.83
VPS28-204ENST00000526054 IL1RAPL1Q9NZN1 696 aa9.89□□□□□ -0.83
VPS28-204ENST00000526054 FAM8A1Q9UBU6 413 aa9.89□□□□□ -0.83
VPS28-204ENST00000526054 TUBD1Q9UJT1 453 aa9.89□□□□□ -0.83
VPS28-204ENST00000526054 ACSL5Q9ULC5 683 aa9.89□□□□□ -0.83
VPS28-204ENST00000526054 PRSS21Q9Y6M0 314 aa9.89□□□□□ -0.83
VPS28-204ENST00000526054 MN1Q10571 1320 aaPredicted RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 LILRA5A6NI73 299 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 H3BMM5 538 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 LIN7AO14910 233 aaPredicted RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 STK17BO94768 372 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 VIPP01282 170 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 ESR1P03372 595 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 RPL10P27635 214 aaKnown RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 MAP4P27816 1152 aaKnown RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 SLC1A2P43004 574 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 TUBB4BP68371 445 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 PLOD1Q02809 727 aaPredicted RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 RPA4Q13156 261 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 CUL1Q13616 776 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 BOP1Q14137 746 aaKnown RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 FRG1Q14331 258 aaKnown RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 FASTKD3Q14CZ7 662 aaKnown RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 TMED2Q15363 201 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 TRADDQ15628 312 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 HSP90AA5PQ58FG0 334 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 METRNLQ641Q3 311 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 ABRAXAS1Q6UWZ7 409 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 FAM83HQ6ZRV2 1179 aaPredicted RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 KIAA0408Q6ZU52 694 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 PTRH1Q86Y79 214 aaKnown RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 PLXDC1Q8IUK5 500 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 PALM2Q8IXS6 379 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 CFAP206Q8IYR0 622 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 UNC5BQ8IZJ1 945 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 GSDMBQ8TAX9 411 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 STARD8Q92502 1023 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 LPGAT1Q92604 370 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 CXorf40BQ96DE9 158 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 WDR83Q9BRX9 315 aaKnown RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 TBC1D10AQ9BXI6 508 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 TSPYL1Q9H0U9 437 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 P2RY12Q9H244 342 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 CCDC68Q9H2F9 335 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 APMAPQ9HDC9 416 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 PPANQ9NQ55 473 aaKnown RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 FBXO8Q9NRD0 319 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 POT1Q9NUX5 634 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 CPNE7Q9UBL6 633 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 DMGDHQ9UI17 866 aaKnown RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 FBXO5Q9UKT4 447 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 TMEM184BQ9Y519 407 aaPredicted RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 UBR5O95071 2799 aaPredicted RBP9.88□□□□□ -0.83
VPS28-204ENST00000526054 NBASA2RRP1 2371 aa9.88□□□□□ -0.83
VPS28-204ENST00000526054 DOPEY2Q9Y3R5 2298 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 LOC101059948A0A1B0GTJ6 334 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 BHMG1C9JSJ3 638 aaPredicted RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 IFRD1O00458 451 aaPredicted RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 KPNA5O15131 536 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 POLR1CO15160 346 aaPredicted RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 NKX2-8O15522 239 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 S1PR4O95977 384 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 APOA4P06727 396 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 GSTA2P09210 222 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 ANKRD34CP0C6C1 535 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 RHOXF2BP0C7M4 288 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 ERVK-10P10266 1014 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 PKMP14618 531 aaKnown RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 XRCC1P18887 633 aaPredicted RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 FMO4P31512 558 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 ADARP55265 1226 aaKnown RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 GFERP55789 205 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 UBE2IP63279 158 aaKnown RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 MPP1Q00013 466 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 FOXM1Q08050 763 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 MGAT5Q09328 741 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 ABHD18Q0P651 414 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 CTBP1Q13363 440 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 TEX35Q5T0J7 233 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 DENND6AQ8IWF6 608 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 CNTN4Q8IWV2 1026 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 RBM12BQ8IXT5 1001 aaKnown RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 IFT20Q8IY31 132 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 ESX1Q8N693 406 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 C9orf43Q8TAL5 461 aaPredicted RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 IFT81Q8WYA0 676 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 FMO2Q99518 471 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 RHOXF2Q9BQY4 288 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 ULBP3Q9BZM4 244 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 WWP1Q9H0M0 922 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 EPN3Q9H201 632 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 TRIT1Q9H3H1 467 aaKnown RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 FBXO6Q9NRD1 293 aaPredicted RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 ZDHHC18Q9NUE0 388 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 SIDT1Q9NXL6 827 aaKnown RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 SCHIP1Q9P0W5 487 aaPredicted RBP9.87□□□□□ -0.83
VPS28-204ENST00000526054 ZFATQ9P243 1243 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 PSMD13Q9UNM6 376 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 CRYL1Q9Y2S2 319 aa9.87□□□□□ -0.83
VPS28-204ENST00000526054 HEBP2Q9Y5Z4 205 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms