RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 FAM49AQ9H0Q0 323 aaPredicted RBP3.73□□□□□ -1.81
NSMCE2-211ENST00000523549 SCRT2Q9NQ03 307 aa3.73□□□□□ -1.81
NSMCE2-211ENST00000523549 RGS18Q9NS28 235 aa3.73□□□□□ -1.81
NSMCE2-211ENST00000523549 TMEM161AQ9NX61 479 aa3.73□□□□□ -1.81
NSMCE2-211ENST00000523549 ANKRD10Q9NXR5 420 aa3.73□□□□□ -1.81
NSMCE2-211ENST00000523549 EPPK1P58107 5090 aaKnown RBP3.73□□□□□ -1.81
NSMCE2-211ENST00000523549 IGSF9BQ9UPX0 1349 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 MYH6P13533 1939 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 CPED1A4D0V7 1026 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 HNRNPCL2B2RXH8 293 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 IPO5O00410 1097 aaKnown RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 SLC25A17O43808 307 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 CRYAAP02489 173 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 KRT7P08729 469 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 TIMP3P35625 211 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 CDKN1AP38936 164 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 ARSFP54793 590 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 PHEXP78562 749 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 LMOD3Q0VAK6 560 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 GRIK2Q13002 908 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 RABL6Q3YEC7 729 aaPredicted RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 ACCSLQ4AC99 568 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 FBXO43Q4G163 708 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 SYCP2LQ5T4T6 812 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 NAPEPLDQ6IQ20 393 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 Q71RC1 249 aaPredicted RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 MYPOPQ86VE0 399 aaPredicted RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 SFTPA2Q8IWL1 248 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 GHDCQ8N2G8 530 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 CIARTQ8N365 385 aaPredicted RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 TSPYL6Q8N831 410 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 ZNF441Q8N8Z8 693 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 TMEM170AQ8WVE7 144 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 SDCCAG3Q96C92 435 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 MTBPQ96DY7 904 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 FEM1CQ96JP0 617 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 SPATA33Q96N06 139 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 MPHOSPH6Q99547 160 aaKnown RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 CLSTN3Q9BQT9 956 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 MMTAG2Q9BU76 263 aaKnown RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 NPLQ9BXD5 320 aaPredicted RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 TRPV5Q9NQA5 729 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 MRPL17Q9NRX2 175 aaKnown RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 SPATS2LQ9NUQ6 558 aaKnown RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 C9orf78Q9NZ63 289 aaPredicted RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 SMARCAL1Q9NZC9 954 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 FEM1BQ9UK73 627 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 CCPG1Q9ULG6 757 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 ISY1Q9ULR0 285 aaKnown RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 TRPV2Q9Y5S1 764 aa3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 NUP210Q8TEM1 1887 aaPredicted RBP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.72□□□□□ -1.81
NSMCE2-211ENST00000523549 ANK1P16157 1881 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 PCLOQ9Y6V0 5065 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 A0A1B0GU03 582 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 MYBPHLA2RUH7 354 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF263O14978 683 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 TNFSF14O43557 240 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 URODP06132 367 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 SFTPCP11686 197 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 CD99P14209 185 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 PSMC3P17980 439 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 CSTF2P33240 577 aaKnown RBP eCLIP3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 ATP12AP54707 1039 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 ERVK11-1P61568 191 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 TIMM10P62072 90 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 DMC1Q14565 340 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 ZSCAN23Q3MJ62 389 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 USH1GQ495M9 461 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 CCDC38Q502W7 563 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 FAM78AQ5JUQ0 283 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 PLA2G4FQ68DD2 849 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 LNX1Q8TBB1 728 aaPredicted RBP3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 ARRDC2Q8TBH0 407 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 LRRC8CQ8TDW0 803 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 RNFT2Q96EX2 444 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 OR1F2PQ96R84 312 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 RPS6KC1Q96S38 1066 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 CHMP4AQ9BY43 222 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 PLEKHA4Q9H4M7 779 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 C8orf33Q9H7E9 229 aaPredicted RBP3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 TTC12Q9H892 705 aaPredicted RBP3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 ZFP14Q9HCL3 533 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 SAYSD1Q9NPB0 183 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 ZFP57Q9NU63 452 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 GTSE1Q9NYZ3 720 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 IFT80Q9P2H3 777 aaPredicted RBP3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 GRHPRQ9UBQ7 328 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 DNAJB4Q9UDY4 337 aa3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 TDRD15B5MCY1 1934 aaKnown RBP3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF638Q14966 1978 aaKnown RBP3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 MYO18AQ92614 2054 aaKnown RBP3.71□□□□□ -1.82
NSMCE2-211ENST00000523549 ESYT2A0FGR8 921 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 hDV102S1A0JD36 115 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 EBAG9O00559 213 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 WNT9BO14905 357 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 EDIL3O43854 480 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 DHX16O60231 1041 aaKnown RBP3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 RTN2O75298 545 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms