RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	ZWINT	O95229	277 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	DANCR	P0C864	163 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	KRT5	P13647	590 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	SLC9A3	P48764	834 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	BMX	P51813	675 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	PDX1	P52945	283 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	B3GALT5-AS1	P59052	145 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	HERV-K104	P61576	105 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	STK4	Q13043	487 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	ZNF497	Q6ZNH5	498 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	TMPRSS11F	Q6ZWK6	438 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	LINC00346	Q8IVM7	164 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	SCML4	Q8N228	414 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	DNAJC22	Q8N4W6	341 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	OR13J1	Q8NGT2	312 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	OR2T11	Q8NH01	316 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	HPSE2	Q8WWQ2	592 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	LPGAT1	Q92604	370 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	DYRK2	Q92630	601 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	JAKMIP2	Q96AA8	810 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	NSL1	Q96IY1	281 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	FNDC11	Q9BVV2	318 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	WNT5B	Q9H1J7	359 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	A4GALT	Q9NPC4	353 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	INTS9	Q9NV88	658 aa	Known RBP	3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	INTS10	Q9NVR2	710 aa	Known RBP	3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	GDE1	Q9NZC3	331 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	CRNN	Q9UBG3	495 aa	Predicted RBP	3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	CACNG5	Q9UF02	275 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	LRWD1	Q9UFC0	647 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	TUBE1	Q9UJT0	475 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	SNX8	Q9Y5X2	465 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	PRSS21	Q9Y6M0	314 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115	RNF215	Q9Y6U7	377 aa		3.75	□□□□□ -1.81
PTPN12-215	ENST00000522115		A0A1B0GU03	582 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	SH2B2	O14492	632 aa	Predicted RBP	3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	ZNF197	O14709	1029 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	TRMU	O75648	421 aa	Known RBP	3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	TOMM70	O94826	608 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	RAF1	P04049	648 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	GABRA5	P31644	462 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	EIF2D	P41214	584 aa	Known RBP	3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	MAGEA11	P43364	429 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	SNX16	P57768	344 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	PSMC6	P62333	389 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	IRX1	P78414	480 aa	Predicted RBP	3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	CDR2	Q01850	454 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	PDLIM3	Q53GG5	364 aa	Predicted RBP	3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	PIGZ	Q86VD9	579 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	TMEM173	Q86WV6	379 aa	Predicted RBP	3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	NUDT13	Q86X67	352 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	COMMD2	Q86X83	199 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	FAM114A1	Q8IWE2	563 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	FBXO39	Q8N4B4	442 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	ZNF485	Q8NCK3	441 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	CCDC107	Q8WV48	283 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	IRGQ	Q8WZA9	623 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	DHX58	Q96C10	678 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	ZNF599	Q96NL3	588 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	TRAF4	Q9BUZ4	470 aa	Predicted RBP	3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	EGLN1	Q9GZT9	426 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	EQTN	Q9NQ60	294 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	SERINC1	Q9NRX5	453 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	MRPL15	Q9P015	296 aa	Known RBP	3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	B3GAT1	Q9P2W7	334 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	RASAL2	Q9UJF2	1139 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	TRIM17	Q9Y577	477 aa		3.74	□□□□□ -1.81
PTPN12-215	ENST00000522115	MSGN1	A6NI15	193 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	GPI	P06744	558 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	HMBS	P08397	361 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	IGHV4-31	P0DP07	118 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	TYMP	P19971	482 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	KRTAP10-12	P60413	245 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	TMEM187	Q14656	261 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	CBWD6	Q4V339	395 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	CBWD3	Q5JTY5	395 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	CYP4A22	Q5TCH4	519 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	ARHGEF16	Q5VV41	709 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	MYPOP	Q86VE0	399 aa	Predicted RBP	3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	DNAAF5	Q86Y56	855 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	NPEPL1	Q8NDH3	523 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	ZNF653	Q96CK0	615 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	TMCO6	Q96DC7	493 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	SPACA9	Q96E40	222 aa	Predicted RBP	3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	PRAC1	Q96KF2	57 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	POM121L2	Q96KW2	1035 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	LINC00479	Q96M42	142 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	OLFM1	Q99784	485 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	PDE7B	Q9NP56	450 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	FGF21	Q9NSA1	209 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	IL17B	Q9UHF5	180 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	CUX2	O14529	1486 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	CECR2	Q9BXF3	1484 aa		3.73	□□□□□ -1.81
PTPN12-215	ENST00000522115	DFFB	O76075	338 aa		3.72	□□□□□ -1.81
PTPN12-215	ENST00000522115	CLK1	P49759	484 aa	Known RBP	3.72	□□□□□ -1.81
PTPN12-215	ENST00000522115	KRTAP10-5	P60370	271 aa		3.72	□□□□□ -1.81
PTPN12-215	ENST00000522115	MAT1A	Q00266	395 aa	Known RBP	3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms