RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 FGD2Q7Z6J4 655 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 OOSP2Q86WS3 158 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 DOLPP1Q86YN1 238 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 MARVELD2Q8N4S9 558 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 AGAP11Q8TF27 550 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 THAP3Q8WTV1 239 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 CA5BP1Q8WTZ4 195 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 PHF10Q8WUB8 498 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 NELFBQ8WX92 580 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 GLYATL1Q969I3 302 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 NSUN5Q96P11 429 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 PEBP4Q96S96 227 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 C17orf62Q9BQA9 187 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 ETNK2Q9NVF9 386 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 KCNN3Q9UGI6 736 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 GPN3Q9UHW5 284 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 NOCTQ9UK39 431 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 LUC7L2Q9Y383 392 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 FHOD1Q9Y613 1164 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 ARID1AO14497 2285 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 DNAJC13O75165 2243 aa8.53□□□□□ -1.04
TRAPPC9-212ENST00000521944 RGSL1A5PLK6 1076 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 SIGLEC16A6NMB1 481 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 BTN3A3O00478 584 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 GNA14O95837 355 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 WDPCPO95876 746 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 HOXD4P09016 255 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 HBQ1P09105 142 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 CDH3P22223 829 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 ADSLP30566 484 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 CTSCP53634 463 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 AIF1P55008 147 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 RAC1P63000 192 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 TMPRSS15P98073 1019 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 FMO1Q01740 532 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 DMPKQ09013 629 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 DPYSQ14117 519 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 NFE2L1Q14494 772 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 ALS2CLQ60I27 953 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 SHISA6Q6ZSJ9 500 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 COX15Q7KZN9 410 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 PHC2Q8IXK0 858 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 TEX26Q8N6G2 289 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 OR4E2Q8NGC2 313 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 PROKR1Q8TCW9 393 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 MBD6Q96DN6 1003 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 PCDHB18PQ96TA0 734 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 NUP85Q9BW27 656 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 SPATA16Q9BXB7 569 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 NAA15Q9BXJ9 866 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 AP1M1Q9BXS5 423 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 TDRD1Q9BXT4 1180 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 SLC7A5P2Q9GIP4 190 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 KIR3DX1Q9H7L2 352 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 IMP3Q9NV31 184 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 CWC15Q9P013 229 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 NDOR1Q9UHB4 597 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 CDC23Q9UJX2 597 aa8.52□□□□□ -1.05
TRAPPC9-212ENST00000521944 SNRNP200O75643 2136 aaKnown RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 MPDZO75970 2070 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 DYTNA2CJ06 578 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 GTPBP10A4D1E9 387 aaKnown RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 E9PLN8 166 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 POP7O75817 140 aaKnown RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 OR2B3O76000 313 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZRANB2O95218 330 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ONECUT2O95948 504 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 CD63P08962 238 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 HALP42357 657 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 MMP13P45452 471 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 GSCP56915 257 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 DSC2Q02487 901 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 CACNG1Q06432 222 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 NIPAL4Q0D2K0 466 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 NKG7Q16617 165 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 DEFB110Q30KQ9 67 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZNF569Q5MCW4 686 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 IRAK1BP1Q5VVH5 260 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 CES4AQ5XG92 561 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 METRNLQ641Q3 311 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ALG1LQ6GMV1 187 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 C8orf86Q6ZUL3 223 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 SIAH3Q8IW03 269 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 FMR1NBQ8N0W7 255 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 NDUFAF2Q8N183 169 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 CIARTQ8N365 385 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZNF655Q8N720 491 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 LILRB4Q8NHJ6 448 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ARRDC2Q8TBH0 407 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 BRIX1Q8TDN6 353 aaKnown RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZFPM2Q8WW38 1151 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 GPR137Q96N19 417 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 VKORC1Q9BQB6 163 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 DHX35Q9H5Z1 703 aaKnown RBP8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 NT5MQ9NPB1 228 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 PKD2L2Q9NZM6 624 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 PTGFRNQ9P2B2 879 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 MAN1B1Q9UKM7 699 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms