RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 Q8N9G6 341 aaPredicted RBP14.93□□□□□ -0.02
LSM1-203ENST00000520755 BANPQ8N9N5 519 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 OR6C4Q8NGE1 309 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 DLG3Q92796 817 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 PDLIM5Q96HC4 596 aaKnown RBP14.93□□□□□ -0.02
LSM1-203ENST00000520755 APOPT1Q96IL0 206 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 CABS1Q96KC9 395 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 ATP6V1G3Q96LB4 118 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 INSM2Q96T92 566 aaPredicted RBP14.93□□□□□ -0.02
LSM1-203ENST00000520755 C12orf65Q9H3J6 166 aaKnown RBP14.93□□□□□ -0.02
LSM1-203ENST00000520755 STN1Q9H668 368 aaKnown RBP14.93□□□□□ -0.02
LSM1-203ENST00000520755 TOR4AQ9NXH8 423 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 SENP1Q9P0U3 644 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 TLK1Q9UKI8 766 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 ADAMTS6Q9UKP5 1117 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 EMCNQ9ULC0 261 aa14.93□□□□□ -0.02
LSM1-203ENST00000520755 DCHS1Q96JQ0 3298 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 ASXL3Q9C0F0 2248 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 PRAMEF33A0A0G2JMD5 474 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 KRT87PA6NCN2 255 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 IFRD1O00458 451 aaPredicted RBP14.92□□□□□ -0.02
LSM1-203ENST00000520755 PPM1DO15297 605 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 NUDT21O43809 227 aaKnown RBP14.92□□□□□ -0.02
LSM1-203ENST00000520755 TYROBPO43914 113 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 OPA1O60313 960 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 SPAG7O75391 227 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 MATN4O95460 622 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 LTA4HP09960 611 aaKnown RBP14.92□□□□□ -0.02
LSM1-203ENST00000520755 MTHFD1P11586 935 aaKnown RBP14.92□□□□□ -0.02
LSM1-203ENST00000520755 XRCC1P18887 633 aaPredicted RBP14.92□□□□□ -0.02
LSM1-203ENST00000520755 SLC19A1P41440 591 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 FASLGP48023 281 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 GLRBP48167 497 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 RGS4P49798 205 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 MAGOHP61326 146 aaKnown RBP14.92□□□□□ -0.02
LSM1-203ENST00000520755 UBE2IP63279 158 aaKnown RBP14.92□□□□□ -0.02
LSM1-203ENST00000520755 PLOD1Q02809 727 aaPredicted RBP14.92□□□□□ -0.02
LSM1-203ENST00000520755 OR4D1Q15615 310 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 TECRLQ5HYJ1 363 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 SBSNQ6UWP8 590 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 SLCO6A1Q86UG4 719 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 CCDC3Q9BQI4 270 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 ACBD3Q9H3P7 528 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 SYNDIG1Q9H7V2 258 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 APOBEC2Q9Y235 224 aaKnown RBP14.92□□□□□ -0.02
LSM1-203ENST00000520755 ACTL7BQ9Y614 415 aa14.92□□□□□ -0.02
LSM1-203ENST00000520755 SPEGQ15772 3267 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 GP1BAP07359 652 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 SBK3P0C264 359 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 COL6A2P12110 1019 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 TFEBP19484 476 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 BDKRB1P46663 353 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 PPM1FP49593 454 aaPredicted RBP14.91□□□□□ -0.02
LSM1-203ENST00000520755 ABRQ12979 859 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 KRT33BQ14525 404 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 TSNQ15631 228 aaKnown RBP14.91□□□□□ -0.02
LSM1-203ENST00000520755 PHKG1Q16816 387 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 PPP1R3AQ16821 1122 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.91□□□□□ -0.02
LSM1-203ENST00000520755 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.91□□□□□ -0.02
LSM1-203ENST00000520755 LRRC8EQ6NSJ5 796 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 C16orf46Q6P387 395 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 ISCA2Q86U28 154 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 MYO1HQ8N1T3 1032 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 TMEM151AQ8N4L1 468 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 AVL9Q8NBF6 648 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 SKA2Q8WVK7 121 aaPredicted RBP14.91□□□□□ -0.02
LSM1-203ENST00000520755 ASB11Q8WXH4 323 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 SLC38A3Q99624 504 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 STMN4Q9H169 189 aaPredicted RBP14.91□□□□□ -0.02
LSM1-203ENST00000520755 POT1Q9NUX5 634 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 TMEM216Q9P0N5 145 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 PCDHGA1Q9Y5H4 931 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 PCM1Q15154 2024 aa14.91□□□□□ -0.02
LSM1-203ENST00000520755 COL27A1Q8IZC6 1860 aaPredicted RBP14.91□□□□□ -0.02
LSM1-203ENST00000520755 ARHGEF33A8MVX0 844 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 GFYI3L273 518 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 TK2O00142 265 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 BTN3A1O00481 513 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 COPEO14579 308 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 CASC3O15234 703 aaKnown RBP14.9□□□□□ -0.02
LSM1-203ENST00000520755 GLRA3O75311 464 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 PSIP1O75475 530 aaKnown RBP14.9□□□□□ -0.02
LSM1-203ENST00000520755 GSTA1P08263 222 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 ALDH4A1P30038 563 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 CRHR1P34998 444 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 KCNC1P48547 511 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 OR1D5P58170 312 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 ATP6V0D1P61421 351 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 ILKQ13418 452 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 MPP2Q14168 576 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 TSNAXIP1Q2TAA8 658 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 CCSMST1Q4G0I0 132 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 N4BP2L1Q5TBK1 243 aaPredicted RBP14.9□□□□□ -0.02
LSM1-203ENST00000520755 DHRS13Q6UX07 377 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 DGLUCYQ7Z3D6 616 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 ZNF438Q7Z4V0 828 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 PHC3Q8NDX5 983 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 OR5AR1Q8NGP9 310 aa14.9□□□□□ -0.02
LSM1-203ENST00000520755 CFAP61Q8NHU2 1237 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms