RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 C4orf47A7E2U8 309 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 SYF2O95926 243 aaKnown RBP17.32■□□□□ 0.36
SDC2-205ENST00000520233 HIST1H2AGP0C0S8 130 aaPredicted RBP17.32■□□□□ 0.36
SDC2-205ENST00000520233 CREB1P16220 341 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 HIST1H2ADP20671 130 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 RPIAP49247 311 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 MAGOHP61326 146 aaKnown RBP17.32■□□□□ 0.36
SDC2-205ENST00000520233 OR4D1Q15615 310 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 PHKG1Q16816 387 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 TTMPQ5BVD1 217 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 TECRLQ5HYJ1 363 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.32■□□□□ 0.36
SDC2-205ENST00000520233 CDHR3Q6ZTQ4 885 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 RAD51AP1Q96B01 352 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 SH3KBP1Q96B97 665 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 SCYL1Q96KG9 808 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 HIST1H2AHQ96KK5 128 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 APOLD1Q96LR9 279 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 ATOH8Q96SQ7 321 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 HIST1H2AJQ99878 128 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 MRPL57Q9BQC6 102 aaKnown RBP17.32■□□□□ 0.36
SDC2-205ENST00000520233 H2AFJQ9BTM1 129 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 KIR3DX1Q9H7L2 352 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 UCK1Q9HA47 277 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 RDH14Q9HBH5 336 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 RNF112Q9ULX5 631 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 PADI4Q9UM07 663 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 BTBD3Q9Y2F9 522 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 OARD1Q9Y530 152 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 GPR179Q6PRD1 2367 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 WDFY4Q6ZS81 3184 aa17.32■□□□□ 0.36
SDC2-205ENST00000520233 HMGB1P1B2RPK0 211 aaPredicted RBP17.31■□□□□ 0.36
SDC2-205ENST00000520233 MYO1CO00159 1063 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 TYROBPO43914 113 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 KDM1AO60341 852 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 GDF9O60383 454 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 KERAO60938 352 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 SPAG7O75391 227 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 KCNC1P48547 511 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 AP1S2P56377 157 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 CDKL1Q00532 357 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 PRKG2Q13237 762 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 GRB7Q14451 532 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 NR0B2Q15466 257 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 PROX2Q3B8N5 592 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 CCDC153Q494R4 210 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 CCSMST1Q4G0I0 132 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 N4BP2L1Q5TBK1 243 aaPredicted RBP17.31■□□□□ 0.36
SDC2-205ENST00000520233 FRA10AC1Q70Z53 315 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 GPSM1Q86YR5 675 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 OR6C4Q8NGE1 309 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 OR9A1PQ8NGU1 263 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 HGH1Q9BTY7 390 aa17.31■□□□□ 0.36
SDC2-205ENST00000520233 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.31■□□□□ 0.36
SDC2-205ENST00000520233 IQCGQ9H095 443 aaKnown RBP17.31■□□□□ 0.36
SDC2-205ENST00000520233 MRPL46Q9H2W6 279 aaKnown RBP17.31■□□□□ 0.36
SDC2-205ENST00000520233 TDRKHQ9Y2W6 561 aaKnown RBP17.31■□□□□ 0.36
SDC2-205ENST00000520233 LY6G6EA0A0G2JKS1 128 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 PABPN1LA6NDY0 278 aaKnown RBP17.3■□□□□ 0.36
SDC2-205ENST00000520233 SYCE1LA8MT33 242 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 PPM1DO15297 605 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 NUDT21O43809 227 aaKnown RBP17.3■□□□□ 0.36
SDC2-205ENST00000520233 TPBGLP0DKB5 382 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 GLB1P16278 677 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 BIRC2Q13490 618 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 GPR18Q14330 331 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 TGFBIQ15582 683 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 CDKL4Q5MAI5 379 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 STPG1Q5TH74 334 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 C16orf46Q6P387 395 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 TMEM26Q6ZUK4 368 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 NAXDQ8IW45 347 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 TMEM151AQ8N4L1 468 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 OR52E1Q8NGJ3 308 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 RHBDD1Q8TEB9 315 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 SETD7Q8WTS6 366 aaKnown RBP17.3■□□□□ 0.36
SDC2-205ENST00000520233 CCDC138Q96M89 665 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 PKP4Q99569 1192 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 EVA1BQ9NVM1 165 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 LRIT1Q9P2V4 623 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 XPR1Q9UBH6 696 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 EMCNQ9ULC0 261 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 PLLPQ9Y342 182 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 RNF215Q9Y6U7 377 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 U3KQA8 63 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 MUC6Q6W4X9 2439 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 KNL1Q8NG31 2342 aa17.3■□□□□ 0.36
SDC2-205ENST00000520233 LILRA5A6NI73 299 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 RHPN2P1A8MT19 583 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 TARM1B6A8C7 271 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 PRPF4O43172 522 aaKnown RBP eCLIP17.29■□□□□ 0.36
SDC2-205ENST00000520233 PLIN3O60664 434 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 PROCP04070 461 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 CKMT1AP12532 417 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 PLA2G5P39877 138 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 DUSP3P51452 185 aaPredicted RBP17.29■□□□□ 0.36
SDC2-205ENST00000520233 LIMK1P53667 647 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 ZNF438Q7Z4V0 828 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 RAB42Q8N4Z0 105 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 TCP10LQ8TDR4 215 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms