RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PTCHD3Q3KNS1 767 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 FAM198BQ6UWH4 519 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 TRIM73Q86UV7 250 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 SYTL1Q8IYJ3 562 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 TBC1D21Q8IYX1 336 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 TXLNBQ8N3L3 684 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 RNF10Q8N5U6 811 aaKnown RBP12.03□□□□□ -0.48
CSMD1-205ENST00000519623 ZBTB2Q8N680 514 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 ELMO1Q92556 727 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 ZNF778Q96MU6 729 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 SLC25A23Q9BV35 468 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 CHRNA10Q9GZZ6 450 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 SPHK1Q9NYA1 384 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 POLG2Q9UHN1 485 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 RIMKLBQ9ULI2 386 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 SNX7Q9UNH6 387 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 ASF1AQ9Y294 204 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 ANKRD12Q6UB98 2062 aa12.02□□□□□ -0.48
CSMD1-205ENST00000519623 SPENQ96T58 3664 aaKnown RBP12.02□□□□□ -0.48
CSMD1-205ENST00000519623 PRRC2CQ9Y520 2896 aaKnown RBP12.02□□□□□ -0.48
CSMD1-205ENST00000519623 HEATR9A2RTY3 570 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 E7EQ34 232 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 GOT2P00505 430 aaKnown RBP12.02□□□□□ -0.49
CSMD1-205ENST00000519623 CHRM5P08912 532 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-205ENST00000519623 OR56A5P0C7T3 313 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 ETS1P14921 441 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 ADRA1DP25100 572 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 SHMT2P34897 504 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 FDFT1P37268 417 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 PLOD1Q02809 727 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-205ENST00000519623 TSTD2Q5T7W7 516 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 LYPLAL1Q5VWZ2 237 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 ZNF534Q76KX8 674 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 PRUNE1Q86TP1 453 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 SLC13A5Q86YT5 568 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-205ENST00000519623 DNAAF3Q8N9W5 541 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 OR4L1Q8NH43 312 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 OR5K2Q8NHB8 316 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 C1orf54Q8WWF1 131 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.02□□□□□ -0.49
CSMD1-205ENST00000519623 TCTN2Q96GX1 697 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 RANBP9Q96S59 729 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 DPH2Q9BQC3 489 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-205ENST00000519623 FRMD8P1Q9BZ68 369 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-205ENST00000519623 SPRTNQ9H040 489 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-205ENST00000519623 CASS4Q9NQ75 786 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 ACSS2Q9NR19 701 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 OR6C2Q9NZP2 312 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 ANKMY1Q9P2S6 941 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 IMPACTQ9P2X3 320 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 PCSK5Q92824 1860 aa12.02□□□□□ -0.49
CSMD1-205ENST00000519623 KLF7O75840 302 aaPredicted RBP12.01□□□□□ -0.49
CSMD1-205ENST00000519623 TMEM63AO94886 807 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 IFNB1P01574 187 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 CTSBP07858 339 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 HBQ1P09105 142 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 CBSLP0DN79 551 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 PEBP1P30086 187 aaKnown RBP12.01□□□□□ -0.49
CSMD1-205ENST00000519623 CCR7P32248 378 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 CBSP35520 551 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 PGDP52209 483 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 SEMA3AQ14563 771 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 NCF4Q15080 339 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 NADK2Q4G0N4 442 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 DNAJC22Q8N4W6 341 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 C19orf47Q8N9M1 422 aaKnown RBP12.01□□□□□ -0.49
CSMD1-205ENST00000519623 GLIS1Q8NBF1 620 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 SPC24Q8NBT2 197 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 SGSM3Q96HU1 749 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 PLAGL1Q9UM63 463 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 ZNF148Q9UQR1 794 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 CDYLQ9Y232 598 aa12.01□□□□□ -0.49
CSMD1-205ENST00000519623 TDRKHQ9Y2W6 561 aaKnown RBP12.01□□□□□ -0.49
CSMD1-205ENST00000519623 GPC4O75487 556 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 OR2B3O76000 313 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 GAS8O95995 478 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 AGXTP21549 392 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 CDC25BP30305 580 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 SNX1Q13596 522 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 SIX1Q15475 284 aaPredicted RBP12□□□□□ -0.49
CSMD1-205ENST00000519623 KYNUQ16719 465 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 RHBDD2Q6NTF9 364 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 AFTPHQ6ULP2 937 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 PPP1R21Q6ZMI0 780 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 NLRP9Q7RTR0 991 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 VRK3Q8IV63 474 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 GPR135Q8IZ08 494 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 SLC22A15Q8IZD6 547 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 FDCSPQ8NFU4 85 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 OR6P1Q8NGX9 317 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 GBP5Q96PP8 586 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 TTC1Q99614 292 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 MENTQ9BUN1 341 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 CARD6Q9BX69 1037 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 AP1M1Q9BXS5 423 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 SLC7A5P2Q9GIP4 190 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 RAB6BQ9NRW1 208 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 TCAF1Q9Y4C2 921 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 PCDHGB7Q9Y5F8 929 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms