RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 OCIAD1Q9NX40 245 aa21.34■■□□□ 1.01
VEGFA-217ENST00000518538 TAS2R13Q9NYV9 303 aa21.34■■□□□ 1.01
VEGFA-217ENST00000518538 MTRF1LQ9UGC7 380 aaKnown RBP21.34■■□□□ 1.01
VEGFA-217ENST00000518538 POMT2Q9UKY4 750 aa21.34■■□□□ 1.01
VEGFA-217ENST00000518538 ZMIZ1Q9ULJ6 1067 aa21.34■■□□□ 1.01
VEGFA-217ENST00000518538 NFS1Q9Y697 457 aa21.34■■□□□ 1.01
VEGFA-217ENST00000518538 FRYQ5TBA9 3013 aa21.34■■□□□ 1.01
VEGFA-217ENST00000518538 TCRBV9S1A1TA0A576 114 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 TLCD2A6NGC4 264 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 B4E171 279 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 BTN3A3O00478 584 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 C1orf105O95561 183 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 CBSLP0DN79 551 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 ENO3P13929 434 aaPredicted RBP21.33■■□□□ 1.01
VEGFA-217ENST00000518538 CD9P21926 228 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 CBSP35520 551 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 TSPAN7P41732 249 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 SKIV2L2P42285 1042 aaKnown RBP21.33■■□□□ 1.01
VEGFA-217ENST00000518538 ABCG1P45844 678 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 KYNUQ16719 465 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 ST3GAL2Q16842 350 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 KLHL38Q2WGJ6 581 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 RBM20Q5T481 1227 aaKnown RBP21.33■■□□□ 1.01
VEGFA-217ENST00000518538 TTC23LQ6PF05 361 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 C3orf62Q6ZUJ4 267 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 ADGRF3Q8IZF5 1079 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 CARFQ8N187 725 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 BMPERQ8N8U9 685 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 KLHL6Q8WZ60 621 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 CDKL2Q92772 493 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 TAAR9Q96RI9 348 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 MAP3K3Q99759 626 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 B3GNT4Q9C0J1 378 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 L2HGDHQ9H9P8 463 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 OR6C2Q9NZP2 312 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 TRMT6Q9UJA5 497 aaKnown RBP21.33■■□□□ 1.01
VEGFA-217ENST00000518538 TSR3Q9UJK0 312 aaKnown RBP21.33■■□□□ 1.01
VEGFA-217ENST00000518538 RUVBL2Q9Y230 463 aaKnown RBP21.33■■□□□ 1.01
VEGFA-217ENST00000518538 PSAT1Q9Y617 370 aa21.33■■□□□ 1.01
VEGFA-217ENST00000518538 CHD8Q9HCK8 2581 aa21.33■■□□□ 1
VEGFA-217ENST00000518538 GSAPA4D1B5 854 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 C2orf74A8MZ97 194 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 EIF3FO00303 357 aaPredicted RBP21.32■■□□□ 1
VEGFA-217ENST00000518538 NVLO15381 856 aaKnown RBP21.32■■□□□ 1
VEGFA-217ENST00000518538 TLX3O43711 291 aaPredicted RBP21.32■■□□□ 1
VEGFA-217ENST00000518538 PKLRP30613 574 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 CCNFP41002 786 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 SEPHS1P49903 392 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 KPNA2P52292 529 aaKnown RBP21.32■■□□□ 1
VEGFA-217ENST00000518538 GPX6P59796 221 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 TIAL1Q01085 375 aaKnown RBP eCLIP21.32■■□□□ 1
VEGFA-217ENST00000518538 CUL1Q13616 776 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 CEP128Q6ZU80 1094 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 STRA8Q7Z7C7 330 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 MAGEC3Q8TD91 643 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 USP7Q93009 1102 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 RAD51AP1Q96B01 352 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 MENTQ9BUN1 341 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 LRRC4CQ9HCJ2 640 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 SMYD2Q9NRG4 433 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 SIDT1Q9NXL6 827 aaKnown RBP21.32■■□□□ 1
VEGFA-217ENST00000518538 PLAGL1Q9UM63 463 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 ACACBO00763 2458 aa21.32■■□□□ 1
VEGFA-217ENST00000518538 IGHV5-51A0A0C4DH38 117 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 PIPSLA2A3N6 862 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 PSIP1O75475 530 aaKnown RBP21.31■■□□□ 1
VEGFA-217ENST00000518538 SPAG6O75602 509 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 MPC1LP0DKB6 136 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 SLC5A2P31639 672 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 BDKRB1P46663 353 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 RAB28P51157 221 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 CDKN2DP55273 166 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 PCBP4P57723 403 aaKnown RBP21.31■■□□□ 1
VEGFA-217ENST00000518538 RAB15P59190 212 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 MC2RQ01718 297 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 ILF2Q12905 390 aaKnown RBP21.31■■□□□ 1
VEGFA-217ENST00000518538 GRB7Q14451 532 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 TMEM164Q5U3C3 297 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 HECTD2Q5U5R9 776 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 FAM45BPQ6NSW5 357 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 ZC3HC1Q86WB0 502 aaKnown RBP21.31■■□□□ 1
VEGFA-217ENST00000518538 KMT5CQ86Y97 462 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 CPNE9Q8IYJ1 553 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 GPATCH11Q8N954 259 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 FAM45AQ8TCE6 357 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 IFT81Q8WYA0 676 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 SLC41A2Q96JW4 573 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 DDA1Q9BW61 102 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 RAB11FIP5Q9BXF6 653 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 TWSG1Q9GZX9 223 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 TSPYL1Q9H0U9 437 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 SLC39A1Q9NY26 324 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 ACTR10Q9NZ32 417 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 RAXQ9Y2V3 346 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 PCDHGA3Q9Y5H0 932 aa21.31■■□□□ 1
VEGFA-217ENST00000518538 FAM159BA6NKW6 160 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 C9orf172C9J069 976 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 ZNF500O60304 480 aaPredicted RBP21.3■■□□□ 1
VEGFA-217ENST00000518538 PRAMEF10O60809 474 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 CHRM5P08912 532 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms