RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 CRB3Q9BUF7 120 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 NUP85Q9BW27 656 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MIS12Q9H081 205 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TTYH1Q9H313 450 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 EPB41L5Q9HCM4 733 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SDR39U1Q9NRG7 319 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FGF21Q9NSA1 209 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MAN2C1Q9NTJ4 1040 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CACNG4Q9UBN1 327 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GRHPRQ9UBQ7 328 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GAGE2DQ9UEU5 116 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FEM1BQ9UK73 627 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PNMA2Q9UL42 364 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TNNQ9UQP3 1299 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 WIPI2Q9Y4P8 454 aa0.73□□□□□ -2.29
RNU6-1258P-201ENST00000516911 IGLV4-3A0A075B6K6 122 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KIR2DL5BA0A0G2JN68 375 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KIR2DL5BA0A0G2JPC4 375 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 hCG_1642624A0A1W2PR95 340 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PLEKHD1A6NEE1 506 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PDHXO00330 501 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ATP2A1O14983 1001 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PLPP2O43688 288 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 DFNA5O60443 496 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GLRA3O75311 464 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 DAB1O75553 588 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SEC31AO94979 1220 aaKnown RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SEC24AO95486 1093 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ICAM1P05362 532 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ATP1A3P13637 1013 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HSD3B1P14060 373 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SELLP14151 372 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GIFP27352 417 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ETV5P41161 510 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 LBX1P52954 281 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RARSP54136 660 aaKnown RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 EIF3BP55884 814 aaKnown RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MVPQ14764 893 aaKnown RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 POSTNQ15063 836 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 Q1RN00 199 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PDLIM3Q53GG5 364 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KLHL26Q53HC5 615 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RAB6CQ53S08 254 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MDH1BQ5I0G3 518 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MAP3K21Q5TCX8 1036 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF530Q6P9A1 599 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SLC25A47Q6Q0C1 308 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 REG3GQ6UW15 175 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ATG9AQ7Z3C6 839 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SERINC5Q86VE9 423 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PHC2Q8IXK0 858 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CFAP206Q8IYR0 622 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ENTHD1Q8IYW4 607 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KIR2DL5AQ8N109 375 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MAPKAPK5-AS1Q8N8E1 139 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PHLDA1Q8WV24 401 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 STARD4Q96DR4 205 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FAM81BQ96LP2 452 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SPAG5Q96R06 1193 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MAPKAP1Q9BPZ7 522 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PANK2Q9BZ23 570 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HOXD1Q9GZZ0 328 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RAB6CQ9H0N0 254 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 S1PR5Q9H228 398 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CPVLQ9H3G5 476 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 A4GALTQ9NPC4 353 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CUTCQ9NTM9 273 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 P4HTMQ9NXG6 502 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 WSB2Q9NYS7 404 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KCND2Q9NZV8 630 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF581Q9P0T4 197 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 THAP10Q9P2Z0 257 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 BAIAP2L1Q9UHR4 511 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 LNPEPQ9UIQ6 1025 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 OSGIN1Q9UJX0 560 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GJD2Q9UKL4 321 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CAMK2AQ9UQM7 478 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TMEM184BQ9Y519 407 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CLIC4Q9Y696 253 aa0.72□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 IQCMA0A1B0GVH7 501 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 A0A1W2PQ67 120 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 A0A1W2PR80 420 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 WI2-2373I1.2A0A1W2PRP0 233 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 B9A039 149 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 H0YAE9 185 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CDK2AP2O75956 126 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 APBB3O95704 486 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 VTNP04004 478 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ODC1P11926 461 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 AOC1P19801 751 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ABCD1P33897 745 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ELK3P41970 407 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MSH2P43246 934 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 KHKP50053 298 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 XGP55808 180 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ABCE1P61221 599 aaKnown RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SNRPEP62304 92 aaKnown RBP0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CX3CL1P78423 397 aa0.71□□□□□ -2.3
RNU6-1258P-201ENST00000516911 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms