RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ATP13A3Q9H7F0 1226 aa2.38□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PAG1Q9NWQ8 432 aa2.38□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TEX10Q9NXF1 929 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1088P-201ENST00000516850 C9orf78Q9NZ63 289 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CACNG4Q9UBN1 327 aa2.38□□□□□ -2.03
RNU6-1088P-201ENST00000516850 EXO1Q9UQ84 846 aaKnown RBP2.38□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PIAS3Q9Y6X2 628 aa2.38□□□□□ -2.03
RNU6-1088P-201ENST00000516850 IGLV3-10A0A075B6K4 115 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 FRMD3A2A2Y4 597 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 A8MU10 97 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 A8MZ25 164 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SOCS3O14543 225 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 EPHB6O15197 1021 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 AVILO75366 819 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 EIF3JO75822 258 aaKnown RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 C22orf31O95567 290 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 RB1P06400 928 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PRKACGP22612 351 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 OPRL1P41146 370 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 RPL21P46778 160 aaKnown RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TMEM50BP56557 158 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 GSCP56915 257 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 NFATC2Q13469 925 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MAMLD1Q13495 774 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 KIAA0930Q6ICG6 404 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ADIPOR2Q86V24 386 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 Q8N377 158 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TRIML1Q8N9V2 468 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 C1orf131Q8NDD1 294 aaKnown RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PAPD5Q8NDF8 572 aaKnown RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 NUP37Q8NFH4 326 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 VANGL1Q8TAA9 524 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MORC4Q8TE76 937 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SMAP2Q8WU79 429 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PHLDA1Q8WV24 401 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CCDC107Q8WV48 283 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ZFAND2BQ8WV99 257 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 IRGQQ8WZA9 623 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CCDC34Q96HJ3 373 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 GAL3ST4Q96RP7 486 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PSMD1Q99460 953 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 RPP25Q9BUL9 199 aaKnown RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 FNDC11Q9BVV2 318 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 RTN4RQ9BZR6 473 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ARRDC1-AS1Q9H2J1 176 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CPVLQ9H3G5 476 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 UNC45AQ9H3U1 944 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PANK4Q9NVE7 773 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ORC3Q9UBD5 711 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 RHCGQ9UBD6 479 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TUBE1Q9UJT0 475 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 GRIP1Q9Y3R0 1128 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ANGPTL3Q9Y5C1 460 aa2.37□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TDRD9Q8NDG6 1382 aaKnown RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MEX3AA1L020 520 aaKnown RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ASB14A6NK59 587 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 C15orf61A6NNL5 157 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TSPAN1O60635 241 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 RNASEH1O60930 286 aaKnown RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 IGHV3-13P01766 116 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 VPREB1P12018 145 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PRLRP16471 622 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 LHCGRP22888 699 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 RBMS1P29558 406 aaKnown RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PNRC1Q12796 327 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 COX10Q12887 443 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PDLIM3Q53GG5 364 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 KLHL26Q53HC5 615 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 LCN1P1Q5VSP4 162 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TMCO3Q6UWJ1 677 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MMS22LQ6ZRQ5 1243 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CHST9Q7L1S5 443 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 RSRC2Q7L4I2 434 aaKnown RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 EID3Q8N140 333 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 FBXL16Q8N461 479 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PRSS33Q8NF86 280 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 IL17REQ8NFR9 667 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 OR13C3Q8NGS6 347 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 OR13J1Q8NGT2 312 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MOSPD2Q8NHP6 518 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 OLIG1Q8TAK6 271 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MAPK15Q8TD08 544 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 UCMAQ8WVF2 138 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CEP295NLQ96MC4 621 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 FNBP1Q96RU3 617 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 BTBD10Q9BSF8 475 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 LMF2Q9BU23 707 aaKnown RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 FTOQ9C0B1 505 aaKnown RBP eCLIP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 HRH4Q9H3N8 390 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 P4HTMQ9NXG6 502 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SPHK1Q9NYA1 384 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 LARSQ9P2J5 1176 aaKnown RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PGAP2Q9UHJ9 254 aa2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ASTN2O75129 1339 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1088P-201ENST00000516850 IGHV3OR16-10A0A075B7F0 116 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PRAMEF11O60813 436 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 HPRP00739 348 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 IGHV4-31P0DP07 118 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 LAMP2P13473 410 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms