RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CDC42EP4Q9H3Q1 356 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 DPEP3Q9H4B8 488 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 MANSC1Q9H8J5 431 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 MMRN2Q9H8L6 949 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 VIPAS39Q9H9C1 493 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SIX2Q9NPC8 291 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 CNGB3Q9NQW8 809 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 MBNL1Q9NR56 388 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 DDX28Q9NUL7 540 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ASNSD1Q9NWL6 643 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 OSER1Q9NX31 292 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 AIPL1Q9NZN9 384 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 B4GALT7Q9UBV7 327 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 KLQ9UEF7 1012 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 GNPTGQ9UJJ9 305 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 DNAJC12Q9UKB3 198 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 NUDT5Q9UKK9 219 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 HPCAL4Q9UM19 191 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 LAMP3Q9UQV4 416 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SIK3Q9Y2K2 1263 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 REXO2Q9Y3B8 237 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 PPIAL4AQ9Y536 164 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ADGRG1Q9Y653 693 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ALG6Q9Y672 507 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 BZW2Q9Y6E2 419 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 DNMT3AQ9Y6K1 912 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 CCDC88CQ9P219 2028 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 EML6Q6ZMW3 1958 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 DNAH2Q9P225 4427 aa3.03□□□□□ -1.93
SCARNA13-201ENST00000516672 SPTBP11277 2137 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CHD5Q8TDI0 1954 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 A0A087WUV0 522 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 A0A1B0GVY2 172 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MEGF11A6BM72 1044 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TMEM110-MUSTN1A8MSY1 372 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 DEFB108AA8MXU0 73 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 HHLA1C9JL84 531 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 F8VZ95 297 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 RNF225M0QZC1 329 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 QSOX1O00391 747 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 KPNA3O00505 521 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MCF2LO15068 1137 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 ALOX15BO15296 676 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TEX33O43247 280 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MFAP3LO75121 409 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 RBMXL2O75526 392 aaKnown RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 KLF7O75840 302 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 LATS1O95835 1130 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 LY6G6CO95867 125 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 ZBED1O96006 694 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 F13BP05160 661 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CTSLP07711 333 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MYBL2P10244 700 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 GZMAP12544 262 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 KRT5P13647 590 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 EZRP15311 586 aaKnown RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CYP11B1P15538 503 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC25A16P16260 332 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 FERP16591 822 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 DRD4P21917 467 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 USF1P22415 310 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 HTR1BP28222 390 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 GNA15P30679 374 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CDH5P33151 784 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 NTF4P34130 210 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 PRKCIP41743 596 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MAPK9P45984 424 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 SGSHP51688 502 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC5A3P53794 718 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 UBASH3AP57075 661 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MAP3K7CLP57077 242 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 JAM2P57087 298 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 IRX1P78414 480 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 COG7P83436 770 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 ZBED6P86452 979 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CDK17Q00537 523 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CDR2Q01850 454 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 PTSQ03393 145 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 KIF5AQ12840 1032 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MAMLD1Q13495 774 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TUBB2AQ13885 445 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TRIM14Q14142 442 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 SEMA3AQ14563 771 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 NCF4Q15080 339 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 WHAMMP3Q1A5X7 153 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 C2orf68Q2NKX9 166 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 PLEKHS1Q5SXH7 462 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 GPRC6AQ5T6X5 926 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 LELP1Q5T871 98 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 RNF219Q5W0B1 726 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 LEG1Q6P5S2 330 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 SCARA5Q6ZMJ2 495 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 THSD4Q6ZMP0 1018 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CLEC20AQ6ZU45 233 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 RRAGAQ7L523 313 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 PIGZQ86VD9 579 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 VPS36Q86VN1 386 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 ARHGEF19Q8IW93 802 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 DSELQ8IZU8 1212 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms