RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 ZNF577Q9BSK1 485 aa2.8□□□□□ -1.96
NEDD4-211ENST00000514893 VN1R1Q9GZP7 353 aa2.8□□□□□ -1.96
NEDD4-211ENST00000514893 ANKRD61A6NGH8 418 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 PI4K2BG5E9Z4 385 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 EPHB6O15197 1021 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 POP4O95707 220 aaKnown RBP2.79□□□□□ -1.96
NEDD4-211ENST00000514893 IGHV4-31P0DP07 118 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 UBL4AP11441 157 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 ABCD3P28288 659 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 OXTRP30559 389 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 SLC6A6P31641 620 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 LMAN1P49257 510 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 B3GALT5-AS1P59052 145 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 NOTUMQ6P988 496 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 LDHAL6AQ6ZMR3 332 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 ARHGAP12Q8IWW6 846 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 MYRIPQ8NFW9 859 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 CALML4Q96GE6 196 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 C10orf90Q96M02 699 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 LGMNQ99538 433 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 NKX3-1Q99801 234 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-211ENST00000514893 HGH1Q9BTY7 390 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 FAM49AQ9H0Q0 323 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-211ENST00000514893 B3GAT2Q9NPZ5 323 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 TAS2R10Q9NYW0 307 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 NAALADL1Q9UQQ1 740 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 GPR52Q9Y2T5 361 aa2.79□□□□□ -1.96
NEDD4-211ENST00000514893 ABCA7Q8IZY2 2146 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 MYH15Q9Y2K3 1946 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 PRSS51A0A1B0GVH4 220 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 ZNF840PA6NDX5 716 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 SRRM4A7MD48 611 aaKnown RBP2.78□□□□□ -1.96
NEDD4-211ENST00000514893 GAPDHSO14556 408 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-211ENST00000514893 AVILO75366 819 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 MGMTP16455 207 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 TMEM11P17152 192 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 CNTFP26441 200 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 GALCP54803 685 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 CEBPZQ03701 1054 aaKnown RBP2.78□□□□□ -1.96
NEDD4-211ENST00000514893 NIPAL4Q0D2K0 466 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 OS9Q13438 667 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-211ENST00000514893 GLDNQ6ZMI3 551 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-211ENST00000514893 ZFAND4Q86XD8 727 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 ARMC8Q8IUR7 673 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 PHLDA1Q8WV24 401 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-211ENST00000514893 SERAC1Q96JX3 654 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 MGME1Q9BQP7 344 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 ARRDC1-AS1Q9H2J1 176 aa2.78□□□□□ -1.96
NEDD4-211ENST00000514893 A0A1W2PQF6 199 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 TRIM49BA6NDI0 452 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 FAM220BPB1ANY3 271 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 SHISA9B4DS77 424 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 HAT1O14929 419 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 SCAMP1O15126 338 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 HOXC11O43248 304 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-211ENST00000514893 RNASEH1O60930 286 aaKnown RBP2.77□□□□□ -1.97
NEDD4-211ENST00000514893 GLRA3O75311 464 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 CDK2AP2O75956 126 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 HSD3B1P14060 373 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 FDPSP14324 419 aaKnown RBP2.77□□□□□ -1.97
NEDD4-211ENST00000514893 HARS2P49590 506 aaKnown RBP2.77□□□□□ -1.97
NEDD4-211ENST00000514893 PDX1P52945 283 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 SNRPEP62304 92 aaKnown RBP2.77□□□□□ -1.97
NEDD4-211ENST00000514893 NDPQ00604 133 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 TNIP1Q15025 636 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 FAM182AQ5T1J6 154 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 SLC9C2Q5TAH2 1124 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 GRTP1Q5TC63 336 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 ACSM2BQ68CK6 577 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 GDPGP1Q6ZNW5 385 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 CNTROBQ8N137 903 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 KLHDC1Q8N7A1 406 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 RHOXF1Q8NHV9 184 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 TBC1D16Q8TBP0 767 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 DDOQ99489 341 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 CHCHD5Q9BSY4 110 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 NUP85Q9BW27 656 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 ZNF701Q9NV72 531 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-211ENST00000514893 PPP2R2CQ9Y2T4 447 aa2.77□□□□□ -1.97
NEDD4-211ENST00000514893 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.77□□□□□ -1.972e-9■■■■■ 33.6
NEDD4-211ENST00000514893 A0A087WWV3 80 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 A0A1W2PR80 420 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 SEC24AO95486 1093 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 SPARCP09486 303 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 SLC2A2P11168 524 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-211ENST00000514893 ICAM3P32942 547 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 MAZP56270 477 aaKnown RBP2.76□□□□□ -1.97
NEDD4-211ENST00000514893 RPS3AP61247 264 aaKnown RBP2.76□□□□□ -1.97
NEDD4-211ENST00000514893 PPP2R2BQ00005 443 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 GUCY2DQ02846 1103 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 DMPKQ09013 629 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 ZSCAN23Q3MJ62 389 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 C10orf62Q5T681 223 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-211ENST00000514893 LCN1P1Q5VSP4 162 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 CES4AQ5XG92 561 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 TMEM207Q6UWW9 146 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 PHC2Q8IXK0 858 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 TSPYL6Q8N831 410 aa2.76□□□□□ -1.97
NEDD4-211ENST00000514893 GATAD1Q8WUU5 269 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms