RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 XYLT2Q9H1B5 865 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 HS3ST4Q9Y661 456 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 MYH1P12882 1939 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 UBXN8O00124 270 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 DNAJB5O75953 348 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 APODP05090 189 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 RPLP0P05388 317 aaKnown RBP12.92□□□□□ -0.34
TCOF1-213ENST00000514442 S100A9P06702 114 aaKnown RBP12.92□□□□□ -0.34
TCOF1-213ENST00000514442 ACVRL1P37023 503 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 HSPA7P48741 367 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 MAPK12P53778 367 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 TAS2R39P59534 338 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 SIM2Q14190 667 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-213ENST00000514442 TMEM236Q5W0B7 351 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
TCOF1-213ENST00000514442 GALNT5Q7Z7M9 940 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 OR8H3Q8N146 312 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 CPA6Q8N4T0 437 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 UBE2E3Q969T4 207 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 TP53INP1Q96A56 240 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 AP2M1Q96CW1 435 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 RIMS3Q9UJD0 308 aa12.92□□□□□ -0.34
TCOF1-213ENST00000514442 H0YAE9 185 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 PCCBP05166 539 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 CHST15Q7LFX5 561 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 ZNF280BQ86YH2 543 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 CPNE9Q8IYJ1 553 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 SH3RF2Q8TEC5 729 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 ZUFSPQ96AP4 578 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 SPACA7Q96KW9 195 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 C11orf49Q9H6J7 331 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 KCTD5Q9NXV2 234 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 ADGRE2Q9UHX3 823 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 C12orf71A8MTZ7 269 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 ERAL1O75616 437 aaKnown RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 ELP6Q0PNE2 266 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 ZNF404Q494X3 552 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 DUS1LQ6P1R4 473 aaKnown RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 ZNF549Q6P9A3 640 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 TBC1D15Q8TC07 691 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 VMP1Q96GC9 406 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 OR52E6Q96RD3 313 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 PANX1Q96RD7 426 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 AARSD1Q9BTE6 412 aaKnown RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 ENOPH1Q9UHY7 261 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 ZNF490Q9ULM2 529 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 PCDHB1Q9Y5F3 818 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 PLK4O00444 970 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 MYL12BO14950 172 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 MTHFD1P11586 935 aaKnown RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 CXCR2P25025 360 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 HTR1BP28222 390 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 IDH2P48735 452 aaKnown RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 WNT7BP56706 349 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 VBP1P61758 197 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 AHSA2Q719I0 299 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 FSTL5Q8N475 847 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 FCGR1BQ92637 280 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 CENPIQ92674 756 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 CLIP3Q96DZ5 547 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 REXO5Q96IC2 774 aaKnown RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 QRFPRQ96P65 431 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 HAPLN2Q9GZV7 340 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 FAM83DQ9H4H8 585 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 EIF2B3Q9NR50 452 aaKnown RBP12.91□□□□□ -0.34
TCOF1-213ENST00000514442 LAMA4Q16363 1823 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 PIRO00625 290 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 FFAR2O15552 330 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 NOBOXO60393 691 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 IL7RP16871 459 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 CAP1Q01518 475 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 NPTX1Q15818 432 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 NAPRTQ6XQN6 538 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 SPATA19Q7Z5L4 167 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 TMPRSS11BQ86T26 416 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 TWIST2Q8WVJ9 160 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 APOLD1Q96LR9 279 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 PRRG3Q9BZD7 231 aa12.91□□□□□ -0.34
TCOF1-213ENST00000514442 H3BM21 787 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 RAP2AP10114 183 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 CPOXP36551 454 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 SLC15A1P46059 708 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 APOFQ13790 326 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 BRSK1Q8TDC3 778 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 CRYGNQ8WXF5 182 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 HDAC2Q92769 488 aaKnown RBP12.9□□□□□ -0.34
TCOF1-213ENST00000514442 NELL1Q92832 810 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 SERHL2Q9H4I8 314 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 SERHLQ9NQF3 203 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 ZDHHC2Q9UIJ5 367 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 HAT1O14929 419 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 SERPINA1P01009 418 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 DGKGP49619 791 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 CBX2Q14781 532 aaPredicted RBP12.9□□□□□ -0.34
TCOF1-213ENST00000514442 BICRALQ6AI39 1079 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 VN1R5Q7Z5H4 357 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 DEPDC4Q8N2C3 294 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 OR2T12Q8NG77 320 aa12.9□□□□□ -0.34
TCOF1-213ENST00000514442 TADA1Q96BN2 335 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms