RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 CARS2Q9HA77 564 aaKnown RBP15.6■□□□□ 0.09
NUP54-214ENST00000514307 TCF7L2Q9NQB0 619 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 DNAJC11Q9NVH1 559 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 POLG2Q9UHN1 485 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 MUTYHQ9UIF7 546 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 ASF1AQ9Y294 204 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 HEBP2Q9Y5Z4 205 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 SCN8AQ9UQD0 1980 aa15.6■□□□□ 0.09
NUP54-214ENST00000514307 PLXNA2O75051 1894 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 PRSS38A1L453 326 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 ARHGEF33A8MVX0 844 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 ACP5P13686 325 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 HGFP14210 728 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 CD27P26842 260 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 SERPINB3P29508 390 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 HOXA6P31267 233 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 HALP42357 657 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 GNPDA1P46926 289 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 SRP54P61011 504 aaKnown RBP15.59■□□□□ 0.09
NUP54-214ENST00000514307 DMTNQ08495 405 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 PLA2G4EQ3MJ16 856 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 LACTB2Q53H82 288 aaPredicted RBP15.59■□□□□ 0.09
NUP54-214ENST00000514307 NXNQ6DKJ4 435 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 CAPRIN2Q6IMN6 1127 aaKnown RBP15.59■□□□□ 0.09
NUP54-214ENST00000514307 AGTRAPQ6RW13 159 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 RPS27LQ71UM5 84 aaKnown RBP15.59■□□□□ 0.09
NUP54-214ENST00000514307 LPCAT2Q7L5N7 544 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 TBC1D21Q8IYX1 336 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 LILRA3Q8N6C8 439 aaPredicted RBP15.59■□□□□ 0.09
NUP54-214ENST00000514307 FITM2Q8N6M3 262 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 SNX31Q8N9S9 440 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 TMEM145Q8NBT3 493 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 METTL6Q8TCB7 284 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 ACTRT2Q8TDY3 377 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 KLHDC7BQ96G42 594 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 RMDN2Q96LZ7 410 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 NSUN5Q96P11 429 aaKnown RBP15.59■□□□□ 0.09
NUP54-214ENST00000514307 PKP4Q99569 1192 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 NUF2Q9BZD4 464 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 TPSD1Q9BZJ3 242 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 ZDHHC5Q9C0B5 715 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 CD93Q9NPY3 652 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 TRNAU1APQ9NX07 287 aaKnown RBP15.59■□□□□ 0.09
NUP54-214ENST00000514307 KLQ9UEF7 1012 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.59■□□□□ 0.09
NUP54-214ENST00000514307 COLEC10Q9Y6Z7 277 aa15.59■□□□□ 0.09
NUP54-214ENST00000514307 ATXN2Q99700 1313 aaKnown RBP15.59■□□□□ 0.09
NUP54-214ENST00000514307 CCDC163A0A0D9SF12 145 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 MYO1CO00159 1063 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 FCHO1O14526 889 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 HNRNPCL1O60812 293 aaKnown RBP15.58■□□□□ 0.08
NUP54-214ENST00000514307 WDR47O94967 919 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 CLDN9O95484 217 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 FUCA1P04066 466 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 NCF2P19878 526 aaPredicted RBP15.58■□□□□ 0.08
NUP54-214ENST00000514307 CCND1P24385 295 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 ADSLP30566 484 aaPredicted RBP15.58■□□□□ 0.08
NUP54-214ENST00000514307 SLC6A12P48065 614 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 RASSF2P50749 326 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 BLKP51451 505 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 HNRNPH2P55795 449 aaKnown RBP15.58■□□□□ 0.08
NUP54-214ENST00000514307 IRX1P78414 480 aaPredicted RBP15.58■□□□□ 0.08
NUP54-214ENST00000514307 SIGLEC14Q08ET2 396 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 ARHGAP19Q14CB8 494 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 PTCHD3Q3KNS1 767 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 UGT3A2Q3SY77 523 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 TJAP1Q5JTD0 557 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 TMEM31Q5JXX7 168 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 KANK2Q63ZY3 851 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 CAPN13Q6MZZ7 669 aaPredicted RBP15.58■□□□□ 0.08
NUP54-214ENST00000514307 WASH2PQ6VEQ5 465 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 GCNT7Q6ZNI0 430 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 FAM83HQ6ZRV2 1179 aaPredicted RBP15.58■□□□□ 0.08
NUP54-214ENST00000514307 DCUN1D3Q8IWE4 304 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 KLHDC8AQ8IYD2 350 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 RLN3Q8WXF3 142 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 EDAQ92838 391 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 FERD3LQ96RJ6 166 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 OSGEPL1Q9H4B0 414 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 MVB12BQ9H7P6 319 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 MEAF6Q9HAF1 191 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 ZBTB26Q9HCK0 441 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 WASH6PQ9NQA3 447 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 RIC8BQ9NVN3 520 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 C2orf42Q9NWW7 574 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 FIS1Q9Y3D6 152 aa15.58■□□□□ 0.08
NUP54-214ENST00000514307 TTC28Q96AY4 2481 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 CLGNO14967 610 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 PI15O43692 258 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 RASGRP1O95267 797 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 DCNP07585 359 aaKnown RBP15.57■□□□□ 0.08
NUP54-214ENST00000514307 NDUFS1P28331 727 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 HMOX2P30519 316 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 GDF5P43026 501 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 INHBCP55103 352 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 BTKQ06187 659 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 NAE1Q13564 534 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 KRT72Q14CN4 511 aa15.57■□□□□ 0.08
NUP54-214ENST00000514307 PDCD2Q16342 344 aaPredicted RBP15.57■□□□□ 0.08
NUP54-214ENST00000514307 C18orf21Q32NC0 220 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms