RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 C19orf47Q8N9M1 422 aaKnown RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 GLIS1Q8NBF1 620 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 GALNT11Q8NCW6 608 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 FLVCR1-AS1Q8TAF5 88 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 ELMO1Q92556 727 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 MRFAP1L1Q96HT8 127 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 DPH2Q9BQC3 489 aaPredicted RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 MFRPQ9BY79 579 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 SLC7A5P2Q9GIP4 190 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 SPRTNQ9H040 489 aaPredicted RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 LUZP4Q9P127 313 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 PLAGL1Q9UM63 463 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 ASF1AQ9Y294 204 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 TDRKHQ9Y2W6 561 aaKnown RBP11.8□□□□□ -0.52
SNHG4-208ENST00000514110 MAP4K5Q9Y4K4 846 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 PCDHGB7Q9Y5F8 929 aa11.8□□□□□ -0.52
SNHG4-208ENST00000514110 PIKFYVEQ9Y2I7 2098 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 SLC5A10A0PJK1 596 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 C9J4A7 227 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 OR1I1O60431 355 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 OR2B3O76000 313 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 CHRM5P08912 532 aaPredicted RBP11.79□□□□□ -0.52
SNHG4-208ENST00000514110 HBQ1P09105 142 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 ATXN8OSP0DMR3 200 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 AGXTP21549 392 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 PEBP1P30086 187 aaKnown RBP11.79□□□□□ -0.52
SNHG4-208ENST00000514110 SHMT2P34897 504 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 RAPSNQ13702 412 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 ITIH4Q14624 930 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 C1orf189Q5VU69 101 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 MED25Q71SY5 747 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 KIAA1328Q86T90 577 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 HOOK3Q86VS8 718 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 TBC1D21Q8IYX1 336 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 GPR135Q8IZ08 494 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 UBL4BQ8N7F7 174 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 RBMXL3Q8N7X1 1067 aaKnown RBP11.79□□□□□ -0.52
SNHG4-208ENST00000514110 TMEM102Q8N9M5 508 aaPredicted RBP11.79□□□□□ -0.52
SNHG4-208ENST00000514110 Q8NA96 180 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 OR52K1Q8NGK4 314 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 OR13J1Q8NGT2 312 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 OR5K2Q8NHB8 316 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 ATG4AQ8WYN0 398 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNHG4-208ENST00000514110 TCTN2Q96GX1 697 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 ALS2CR12Q96Q35 445 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 IMPACTQ9P2X3 320 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 SLC2A6Q9UGQ3 507 aa11.79□□□□□ -0.52
SNHG4-208ENST00000514110 USP9XQ93008 2570 aaPredicted RBP11.79□□□□□ -0.52
SNHG4-208ENST00000514110 A0A0J9YY10 115 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 MIF4GDA9UHW6 222 aaKnown RBP11.78□□□□□ -0.52
SNHG4-208ENST00000514110 QSOX1O00391 747 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 PSMD3O43242 534 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 DPM1O60762 260 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 CNOT3O75175 753 aaKnown RBP11.78□□□□□ -0.52
SNHG4-208ENST00000514110 FTH1P02794 183 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 OTX2P32243 289 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 RRADP55042 308 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 CSE1LP55060 971 aaKnown RBP11.78□□□□□ -0.52
SNHG4-208ENST00000514110 FOXL2P58012 376 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 INPP5JQ15735 1006 aaPredicted RBP11.78□□□□□ -0.52
SNHG4-208ENST00000514110 MLIPQ5VWP3 458 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 HIST2H2BCQ6DN03 193 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 RHBDD2Q6NTF9 364 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 MRGPREQ86SM8 312 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 LINC00523Q86TU6 105 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 RAB43Q86YS6 212 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 TMEM139Q8IV31 216 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 TMEM151BQ8IW70 566 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 FAM20CQ8IXL6 584 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 SYCE1Q8N0S2 351 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 N4BP2L2Q92802 583 aaPredicted RBP11.78□□□□□ -0.52
SNHG4-208ENST00000514110 HDAC10Q969S8 669 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 GBP5Q96PP8 586 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 SMAD5Q99717 465 aaKnown RBP11.78□□□□□ -0.52
SNHG4-208ENST00000514110 DHRS4Q9BTZ2 278 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 CHRNA10Q9GZZ6 450 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 RBSNQ9H1K0 784 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 LRRC4CQ9HCJ2 640 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 GPR83Q9NYM4 423 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 OR6C2Q9NZP2 312 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 DHCR7Q9UBM7 475 aaKnown RBP11.78□□□□□ -0.52
SNHG4-208ENST00000514110 POLG2Q9UHN1 485 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 CDYLQ9Y232 598 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 USP9YO00507 2555 aaPredicted RBP11.78□□□□□ -0.52
SNHG4-208ENST00000514110 FER1L5A0AVI2 2057 aa11.78□□□□□ -0.52
SNHG4-208ENST00000514110 SHANK1Q9Y566 2161 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 ISM1B1AKI9 464 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 MASP2O00187 686 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 AGFG2O95081 481 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 GOT2P00505 430 aaKnown RBP11.77□□□□□ -0.53
SNHG4-208ENST00000514110 OR56A5P0C7T3 313 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 GRIA1P42261 906 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 CDH17Q12864 832 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 SEMA3AQ14563 771 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 SSPNQ14714 243 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 SLC9A5Q14940 896 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 SYTL3Q4VX76 610 aa11.77□□□□□ -0.53
SNHG4-208ENST00000514110 FHL5Q5TD97 284 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms