RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 SATB2Q9UPW6 733 aa14.12□□□□□ -0.15
SNF8-212ENST00000514089 RUVBL2Q9Y230 463 aaKnown RBP14.12□□□□□ -0.15
SNF8-212ENST00000514089 LOXL2Q9Y4K0 774 aa14.12□□□□□ -0.15
SNF8-212ENST00000514089 NFS1Q9Y697 457 aa14.12□□□□□ -0.15
SNF8-212ENST00000514089 COL5A1P20908 1838 aaPredicted RBP14.12□□□□□ -0.15
SNF8-212ENST00000514089 A0A087WUV0 522 aaPredicted RBP14.11□□□□□ -0.15
SNF8-212ENST00000514089 PIPSLA2A3N6 862 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 C2orf74A8MZ97 194 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 ISM1B1AKI9 464 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 PLD2O14939 933 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 C1orf105O95561 183 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 INHBAP08476 426 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 MPC1LP0DKB6 136 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 CDH3P22223 829 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 POU4F1Q01851 419 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 CFHR1Q03591 330 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 TSTA3Q13630 321 aaPredicted RBP14.11□□□□□ -0.15
SNF8-212ENST00000514089 UBE2R2Q712K3 238 aaPredicted RBP14.11□□□□□ -0.15
SNF8-212ENST00000514089 TMPRSS9Q7Z410 1059 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 SLITRK4Q8IW52 837 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 C2orf73Q8N5S3 287 aaPredicted RBP14.11□□□□□ -0.15
SNF8-212ENST00000514089 EIF1ADQ8N9N8 165 aaKnown RBP14.11□□□□□ -0.15
SNF8-212ENST00000514089 MCOLN3Q8TDD5 553 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 CCDC77Q9BR77 488 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 RAB11FIP5Q9BXF6 653 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 TRIM54Q9BYV2 358 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 POLR1BQ9H9Y6 1135 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 GPAMQ9HCL2 828 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 WDR70Q9NW82 654 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 OR6C2Q9NZP2 312 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 OGFRQ9NZT2 677 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.11□□□□□ -0.15
SNF8-212ENST00000514089 EPHA6Q9UF33 1036 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 PISDQ9UG56 409 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 WASF3Q9UPY6 502 aa14.11□□□□□ -0.15
SNF8-212ENST00000514089 MTO1Q9Y2Z2 717 aaKnown RBP14.11□□□□□ -0.15
SNF8-212ENST00000514089 TDRD6O60522 2096 aaKnown RBP14.1□□□□□ -0.15
SNF8-212ENST00000514089 ZNF839A8K0R7 811 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 POC1B-GALNT4F8VUJ3 575 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 EIF3FO00303 357 aaPredicted RBP14.1□□□□□ -0.15
SNF8-212ENST00000514089 HGSO14964 777 aaPredicted RBP14.1□□□□□ -0.15
SNF8-212ENST00000514089 TNFSF15O95150 251 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 THRAP10827 490 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 STMN1P16949 149 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 CYP2A7P20853 494 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 FDXRP22570 491 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 ECHS1P30084 290 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 MSH2P43246 934 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 BDKRB1P46663 353 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 LSSP48449 732 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 RAB28P51157 221 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 MAPK10P53779 464 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 GFERP55789 205 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 CYP4F3Q08477 520 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 LGSNQ5TDP6 509 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 TAOK1Q7L7X3 1001 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 PIWIL4Q7Z3Z4 852 aaKnown RBP14.1□□□□□ -0.15
SNF8-212ENST00000514089 NKAPQ8N5F7 415 aaKnown RBP14.1□□□□□ -0.15
SNF8-212ENST00000514089 GIMAP7Q8NHV1 300 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 SLC22A18Q96BI1 424 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 LIN37Q96GY3 246 aaPredicted RBP14.1□□□□□ -0.15
SNF8-212ENST00000514089 CD180Q99467 661 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 RBBP8Q99708 897 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 OLFM1Q99784 485 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 RAB33BQ9H082 229 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 CCDC86Q9H6F5 360 aaKnown RBP14.1□□□□□ -0.15
SNF8-212ENST00000514089 ACTR10Q9NZ32 417 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.1□□□□□ -0.15
SNF8-212ENST00000514089 ICKQ9UPZ9 632 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 MED16Q9Y2X0 877 aa14.1□□□□□ -0.15
SNF8-212ENST00000514089 V9GYY5 206 aaPredicted RBP14.1□□□□□ -0.15
SNF8-212ENST00000514089 EFCAB7A8K855 629 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 BTN3A3O00478 584 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 BTN3A1O00481 513 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 RASGRF2O14827 1237 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 TOX3O15405 576 aaPredicted RBP14.09□□□□□ -0.15
SNF8-212ENST00000514089 KIF1CO43896 1103 aaKnown RBP14.09□□□□□ -0.15
SNF8-212ENST00000514089 FAM155BO75949 473 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 MATN4O95460 622 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 C8GP07360 202 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 CHRM5P08912 532 aaPredicted RBP14.09□□□□□ -0.15
SNF8-212ENST00000514089 HGFP14210 728 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 CD9P21926 228 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 PRDX3P30048 256 aaKnown RBP14.09□□□□□ -0.15
SNF8-212ENST00000514089 HSD17B2P37059 387 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 TAS2R39P59534 338 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 FOXM1Q08050 763 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 EFTUD2Q15029 972 aaKnown RBP eCLIP14.09□□□□□ -0.151e-7■□□□□ 10.6
SNF8-212ENST00000514089 SF1Q15637 639 aaKnown RBP14.09□□□□□ -0.15
SNF8-212ENST00000514089 TMTC4Q5T4D3 741 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 GSPT2Q8IYD1 628 aaKnown RBP14.09□□□□□ -0.15
SNF8-212ENST00000514089 OR9A1PQ8NGU1 263 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 ASB11Q8WXH4 323 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNF8-212ENST00000514089 N4BP2L2Q92802 583 aaPredicted RBP14.09□□□□□ -0.15
SNF8-212ENST00000514089 ABCF3Q9NUQ8 709 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 SOHLH2Q9NX45 425 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 SLC39A1Q9NY26 324 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 TLK1Q9UKI8 766 aa14.09□□□□□ -0.15
SNF8-212ENST00000514089 EXOC1LA0A1B0GW35 172 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms