RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PCM1Q15154 2024 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 TRAV17A0A0B4J275 112 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 IFRD1O00458 451 aaPredicted RBP10.52□□□□□ -0.73
DDX41-216ENST00000513562 BUD23O43709 281 aaKnown RBP10.52□□□□□ -0.73
DDX41-216ENST00000513562 EPOP01588 193 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 CD1EP15812 388 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 MST1P26927 711 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 SOX11P35716 441 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 CHRNA4P43681 627 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 CD151P48509 253 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 TNFSF10P50591 281 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 WNT3AP56704 352 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 ARG2P78540 354 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 BOP1Q14137 746 aaKnown RBP10.52□□□□□ -0.73
DDX41-216ENST00000513562 PDK1Q15118 436 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 SLC5A12Q1EHB4 618 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 ZNF658BQ4V348 819 aaPredicted RBP10.52□□□□□ -0.73
DDX41-216ENST00000513562 TEX44Q53QW1 395 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 SLC9A4Q6AI14 798 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 COX15Q7KZN9 410 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 DNAJC22Q8N4W6 341 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 FLVCR1-AS1Q8TAF5 88 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 BLOC1S5Q8TDH9 187 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 CPLX3Q8WVH0 158 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 MTFMTQ96DP5 389 aaKnown RBP10.52□□□□□ -0.73
DDX41-216ENST00000513562 VPS50Q96JG6 964 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 TEKT5Q96M29 485 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 OR2A14Q96R47 310 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 HGH1Q9BTY7 390 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 HSD3B7Q9H2F3 369 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 COG4Q9H9E3 785 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 MCCC2Q9HCC0 563 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 IRAK4Q9NWZ3 460 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 ABI3Q9P2A4 366 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 SEC14L3Q9UDX4 400 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 FAM153AQ9UHL3 310 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 SH3BGRL2Q9UJC5 107 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 PLCL2Q9UPR0 1127 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 ICKQ9UPZ9 632 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 PIKFYVEQ9Y2I7 2098 aa10.52□□□□□ -0.73
DDX41-216ENST00000513562 ABCA2Q9BZC7 2435 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 A0A0J9YY10 115 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 C17orf113A0A1B0GUU1 675 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 A0A1B0GX78 115 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 DYTNA2CJ06 578 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 ZNF487B1APH4 448 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 PPP1R12AO14974 1030 aaPredicted RBP10.51□□□□□ -0.73
DDX41-216ENST00000513562 SKILP12757 684 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 PTPN3P26045 913 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 CD68P34810 354 aaPredicted RBP10.51□□□□□ -0.73
DDX41-216ENST00000513562 KIR3DL1P43629 444 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 TLE4Q04727 773 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 RBPJQ06330 500 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 CDSNQ15517 529 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 SLC1A5Q15758 541 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 RBBP7Q16576 425 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 SLC25A41Q8N5S1 370 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 ACBD4Q8NC06 268 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 PHC3Q8NDX5 983 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 CHTF18Q8WVB6 975 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 RAPGEF5Q92565 580 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 DLG3Q92796 817 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 MRGPRX2Q96LB1 330 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 SPOCK3Q9BQ16 436 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 SEMA3GQ9NS98 782 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 SPHK1Q9NYA1 384 aa10.51□□□□□ -0.73
DDX41-216ENST00000513562 NXT1Q9UKK6 140 aaKnown RBP10.51□□□□□ -0.73
DDX41-216ENST00000513562 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.73
DDX41-216ENST00000513562 VSTM2BA6NLU5 285 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 AGAP14A8MT82 685 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 STX7O15400 261 aaKnown RBP10.5□□□□□ -0.73
DDX41-216ENST00000513562 SLC19A2O60779 497 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 SRP72O76094 671 aaKnown RBP10.5□□□□□ -0.73
DDX41-216ENST00000513562 USP1O94782 785 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 PROSCO94903 275 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 CLDN14O95500 239 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 HPP00738 406 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 CRYABP02511 175 aaKnown RBP10.5□□□□□ -0.73
DDX41-216ENST00000513562 CHRM5P08912 532 aaPredicted RBP10.5□□□□□ -0.73
DDX41-216ENST00000513562 RALBP11234 206 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 PIM1P11309 404 aaPredicted RBP10.5□□□□□ -0.73
DDX41-216ENST00000513562 ALAS2P22557 587 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 KDELR1P24390 212 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 PDHA2P29803 388 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 SHMT2P34897 504 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 TNNT3P45378 269 aaPredicted RBP10.5□□□□□ -0.73
DDX41-216ENST00000513562 SMSP52788 366 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 ARSFP54793 590 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 CASP6P55212 293 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 RPA4Q13156 261 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 PRKG2Q13237 762 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 PTPRCAPQ14761 206 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 UNC5AQ6ZN44 842 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 SHISA6Q6ZSJ9 500 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 TTLL10Q6ZVT0 673 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 CEP97Q8IW35 865 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 FAM20CQ8IXL6 584 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 DNAJB8Q8NHS0 232 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 DENND1AQ8TEH3 1009 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 PSMF1Q92530 271 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms