RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF883P0CG24 379 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 MTHFD2P13995 350 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 NR1D1P20393 614 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 MAP4P27816 1152 aaKnown RBP12.2□□□□□ -0.46
PDPN-210ENST00000513143 NDUFS1P28331 727 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 SLC19A1P41440 591 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 BDKRB1P46663 353 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 RPIAP49247 311 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 AP1S2P56377 157 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 CDKL1Q00532 357 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 CDKL4Q5MAI5 379 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 C6orf132Q5T0Z8 1188 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 DUS1LQ6P1R4 473 aaKnown RBP12.2□□□□□ -0.46
PDPN-210ENST00000513143 DCUN1D3Q8IWE4 304 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 MINDY1Q8N5J2 469 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 OR5AR1Q8NGP9 310 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 RDH11Q8TC12 318 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 MCOLN3Q8TDD5 553 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 PATE1Q8WXA2 126 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 FERD3LQ96RJ6 166 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 SELENOSQ9BQE4 189 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 TRIM54Q9BYV2 358 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 TRIT1Q9H3H1 467 aaKnown RBP12.2□□□□□ -0.46
PDPN-210ENST00000513143 POT1Q9NUX5 634 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 NLGN3Q9NZ94 848 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 CPSF2Q9P2I0 782 aaKnown RBP12.2□□□□□ -0.46
PDPN-210ENST00000513143 POLG2Q9UHN1 485 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 COLEC10Q9Y6Z7 277 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 PCM1Q15154 2024 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 TRBV23OR9-2A0A075B6M9 112 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 B4DGG1 531 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 PROB1E7EW31 1015 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 G3V2L1 256 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 UBXN8O00124 270 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 MYO1CO00159 1063 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 FFAR2O15552 330 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 KLK8O60259 260 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 NOBOXO60393 691 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 HIST1H2AGP0C0S8 130 aaPredicted RBP12.19□□□□□ -0.46
PDPN-210ENST00000513143 DHRS4L1P0CG22 281 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 TPBGLP0DKB5 382 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 HIST1H2ADP20671 130 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 ATXN3P54252 364 aaPredicted RBP12.19□□□□□ -0.46
PDPN-210ENST00000513143 UBE2IP63279 158 aaKnown RBP12.19□□□□□ -0.46
PDPN-210ENST00000513143 SPEM2Q0P670 501 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 GRB7Q14451 532 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 SF3A2Q15428 464 aaKnown RBP12.19□□□□□ -0.46
PDPN-210ENST00000513143 CSRP2Q16527 193 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 CCSMST1Q4G0I0 132 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 TTC23LQ6PF05 361 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 ZYG11AQ6WRX3 759 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 FRA10AC1Q70Z53 315 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 SLC9B2Q86UD5 537 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 GATAD2AQ86YP4 633 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 SFTPA2Q8IWL1 248 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 ANKRD42Q8N9B4 389 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 PDPRQ8NCN5 879 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 GPR156Q8NFN8 814 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 MAPK15Q8TD08 544 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 SLC37A2Q8TED4 501 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 ZFPM2Q8WW38 1151 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 RAD51AP1Q96B01 352 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 CXorf40BQ96DE9 158 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 HIST1H2AHQ96KK5 128 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 CCDC138Q96M89 665 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 HIST1H2AJQ99878 128 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 H2AFJQ9BTM1 129 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 DUSP23Q9BVJ7 150 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 SLC40A1Q9NP59 571 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 DNAAF2Q9NVR5 837 aaKnown RBP12.19□□□□□ -0.46
PDPN-210ENST00000513143 UTP6Q9NYH9 597 aaKnown RBP12.19□□□□□ -0.46
PDPN-210ENST00000513143 NKIRAS1Q9NYS0 192 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 NUDT4Q9NZJ9 180 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 NCDNQ9UBB6 729 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 COPG2Q9UBF2 871 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 CPNE7Q9UBL6 633 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 MID2Q9UJV3 735 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 TMCO1Q9UM00 188 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 HCN4Q9Y3Q4 1203 aa12.19□□□□□ -0.46
PDPN-210ENST00000513143 PRAMEF33A0A0G2JMD5 474 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 SUPT3HB4E1H0 165 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 SUPT3HO75486 399 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 VIPP01282 170 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 MYL2P10916 166 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 CPA3P15088 417 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 TAC1P20366 129 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 FASLGP48023 281 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 WDR4P57081 412 aaKnown RBP12.18□□□□□ -0.46
PDPN-210ENST00000513143 PRKG2Q13237 762 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 KRT33BQ14525 404 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.18□□□□□ -0.46
PDPN-210ENST00000513143 SULT1C3Q6IMI6 304 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 DBX2Q6ZNG2 339 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 TRIM48Q8IWZ4 208 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 RBM12BQ8IXT5 1001 aaKnown RBP12.18□□□□□ -0.46
PDPN-210ENST00000513143 ARL14Q8N4G2 192 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 ARFGAP2Q8N6H7 521 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 CCDC63Q8NA47 563 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 AVL9Q8NBF6 648 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms