RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 GPR26Q8NDV2 337 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 BORCS5Q969J3 196 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 CNDP1Q96KN2 507 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 LMLNQ96KR4 655 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 FAM129BQ96TA1 746 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 SLC39A3Q9BRY0 314 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 NAT9Q9BTE0 207 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 OSGEPL1Q9H4B0 414 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 UCKL1Q9NWZ5 548 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 NCKAP1Q9Y2A7 1128 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 TMED5Q9Y3A6 229 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 PMF1-BGLAPU3KQ54 211 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 TDRD6O60522 2096 aaKnown RBP8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 SPTBN2O15020 2390 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 RIF1Q5UIP0 2472 aaKnown RBP8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 ZCWPW2A0A1B0GU75 182 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 LATO43561 262 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 TSC22D2O75157 780 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 RECQL5O94762 991 aaPredicted RBP8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 GSRP00390 522 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 KRT8P05787 483 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 SNRPAP09012 282 aaKnown RBP8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 BPIP17213 487 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 DRD1P21728 446 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 S100A1P23297 94 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 HADHAP40939 763 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 P2RY2P41231 377 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 GRIA4P48058 902 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 BMXP51813 675 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 PPP1R8Q12972 351 aaKnown RBP8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 PAGE2BQ5JRK9 111 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 FAAH2Q6GMR7 532 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 NANOGP8Q6NSW7 305 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 BTLAQ7Z6A9 289 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 ERI1Q8IV48 349 aaKnown RBP8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 DDIASQ8IXT1 998 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 ZCCHC7Q8N3Z6 543 aaKnown RBP8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 BANPQ8N9N5 519 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 OR13J1Q8NGT2 312 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 SUN5Q8TC36 379 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 ZNF398Q8TD17 642 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 ISOC1Q96CN7 298 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 LRRC39Q96DD0 335 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 FAM83DQ9H4H8 585 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 KCNK4Q9NYG8 393 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 FBXO10Q9UK96 956 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 OR1A2Q9Y585 309 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 CORINQ9Y5Q5 1042 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 CEPT1Q9Y6K0 416 aa8.52□□□□□ -1.05
LIMCH1-209ENST00000509277 FRYLO94915 3013 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 SPAG17Q6Q759 2223 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 HELZP42694 1942 aaKnown RBP8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 E7ESA3 106 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 ARNTLO00327 626 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 TPP1O14773 563 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 TM9SF1O15321 606 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 NRP2O60462 931 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 SEMA3DO95025 777 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 AHSGP02765 367 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 ACSL1P33121 698 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 CLDN2P57739 230 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 PTK2BQ14289 1009 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 CSHL1Q14406 222 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 TAF1AQ15573 450 aaPredicted RBP8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 ZNF542PQ5EBM4 170 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 SERPINA9Q86WD7 417 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 TRAPPC5Q8IUR0 188 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 PIWIL2Q8TC59 973 aaKnown RBP8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 NCSTNQ92542 709 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 EID2BQ96D98 161 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 VPS39Q96JC1 886 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 GPR174Q9BXC1 333 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 GIN1Q9NXP7 522 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 DKK3Q9UBP4 350 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 PSMD13Q9UNM6 376 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 RPL26L1Q9UNX3 145 aaKnown RBP8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 ACTL7BQ9Y614 415 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 TRBV23OR9-2A0A075B6M9 112 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 FAM95CA0A1B0GW59 222 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 MAGEB16A2A368 324 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 K7ESM1 405 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 MEN1O00255 615 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 NIPSNAP2O75323 286 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 CCDC159P0C7I6 412 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 COX4I1P13073 169 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 TCF3P15923 654 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 NDUFV2P19404 249 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 ITGAXP20702 1163 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 CES1P23141 567 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 GP5P40197 560 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 KIR2DL1P43626 348 aaPredicted RBP8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 GSSP48637 474 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 SEMA3AQ14563 771 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 IMPG1Q17R60 797 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 CCDC153Q494R4 210 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 ATP13A5Q4VNC0 1218 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 BRAT1Q6PJG6 821 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 CROCCP3Q8IVE0 287 aa8.51□□□□□ -1.05
LIMCH1-209ENST00000509277 AADATQ8N5Z0 425 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms