RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 NPHS1O60500 1241 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 C1orf105O95561 183 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 FGF3P11487 239 aaPredicted RBP10.12□□□□□ -0.79
RFC1-211ENST00000509084 AK4P27144 223 aaPredicted RBP10.12□□□□□ -0.79
RFC1-211ENST00000509084 CTSKP43235 329 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 PIK3CGP48736 1102 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 HERVK_113P63132 956 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 KIR2DS5Q14953 304 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 CHI3L2Q15782 390 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 PHKG1Q16816 387 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 PRRT3Q5FWE3 981 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 CFAP157Q5JU67 520 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 SLC30A9Q6PML9 568 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 LAYNQ6UX15 382 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 TAF8Q7Z7C8 310 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 HOMEZQ8IX15 550 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 PTGR2Q8N8N7 351 aaPredicted RBP10.12□□□□□ -0.79
RFC1-211ENST00000509084 OR5K2Q8NHB8 316 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 CFAP61Q8NHU2 1237 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 UBTD2Q8WUN7 234 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 ZFPM2Q8WW38 1151 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 FBXL8Q96CD0 374 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 L3HYPDHQ96EM0 354 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 TRMOQ9BU70 441 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 MECRQ9BV79 373 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 LRRC61Q9BV99 259 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 C1QTNF3Q9BXJ4 246 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 ERVK-6Q9BXR3 956 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 IRF2BPLQ9H1B7 796 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 STN1Q9H668 368 aaKnown RBP10.12□□□□□ -0.79
RFC1-211ENST00000509084 MANSC1Q9H8J5 431 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 UTP6Q9NYH9 597 aaKnown RBP10.12□□□□□ -0.79
RFC1-211ENST00000509084 WWOXQ9NZC7 414 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 SPATA7Q9P0W8 599 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 PNMA8BQ9ULN7 279 aaPredicted RBP10.12□□□□□ -0.79
RFC1-211ENST00000509084 PSMD13Q9UNM6 376 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 DOLKQ9UPQ8 538 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 STK38LQ9Y2H1 464 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 COLEC10Q9Y6Z7 277 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 A6NCN8 305 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 EPN2O95208 641 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 GUCA1CO95843 209 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 SYPP08247 313 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 MTHFD1P11586 935 aaKnown RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 IMPDH1P20839 514 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 BGNP21810 368 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 RPL10P27635 214 aaKnown RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 RXRGP48443 463 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 KCNC1P48547 511 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 GNGT1P63211 74 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 GALNT1Q10472 559 aaPredicted RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 STX3Q13277 289 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 KRT33BQ14525 404 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 ARHGAP19Q14CB8 494 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 PCBP2Q15366 365 aaKnown RBP eCLIP10.11□□□□□ -0.79
RFC1-211ENST00000509084 PFKFB4Q16877 469 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 ZNF542PQ5EBM4 170 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 ZNF678Q5SXM1 525 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 ANKS6Q68DC2 871 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 LRRC70Q7Z2Q7 622 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 NRROSQ86YC3 692 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 TRIM48Q8IWZ4 208 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 RBM12BQ8IXT5 1001 aaKnown RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 ZNF548Q8NEK5 533 aaPredicted RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 OR9A1PQ8NGU1 263 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 PPP4R1Q8TF05 950 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 ZNF75CPQ92670 426 aaPredicted RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 DLG3Q92796 817 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 RHBDF1Q96CC6 855 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 CXorf40BQ96DE9 158 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 PHF21BQ96EK2 531 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 CNDP1Q96KN2 507 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 TMEM237Q96Q45 408 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 ELF4Q99607 663 aaPredicted RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 NSRP1Q9H0G5 558 aaKnown RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 PRDM8Q9NQV8 689 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 POT1Q9NUX5 634 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 IMP3Q9NV31 184 aaKnown RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 THAP1Q9NVV9 213 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 TAAR2Q9P1P5 351 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 TBC1D29Q9UFV1 150 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 LNPEPQ9UIQ6 1025 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 PTBP2Q9UKA9 531 aaKnown RBP10.11□□□□□ -0.79
RFC1-211ENST00000509084 PLEKHM1Q9Y4G2 1056 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 CSNK1G3Q9Y6M4 447 aa10.11□□□□□ -0.79
RFC1-211ENST00000509084 A0A0C4DFX4 3053 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 TP53BP1Q12888 1972 aaPredicted RBP10.1□□□□□ -0.79
RFC1-211ENST00000509084 NEMP2A6NFY4 417 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 NCF1BA6NI72 391 aaPredicted RBP10.1□□□□□ -0.79
RFC1-211ENST00000509084 NCF1CA8MVU1 366 aaPredicted RBP10.1□□□□□ -0.79
RFC1-211ENST00000509084 LMO7DNF2Z398 122 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 GIPC1O14908 333 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 SCAMP1O15126 338 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 AQP9O43315 295 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 MAP3K7O43318 606 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 SHOX2O60902 331 aaPredicted RBP10.1□□□□□ -0.79
RFC1-211ENST00000509084 PIAS2O75928 621 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 SUPT7LO94864 414 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 CER1O95813 267 aa10.1□□□□□ -0.79
RFC1-211ENST00000509084 MLYCDO95822 493 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms