RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SNX31Q8N9S9 440 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 GPR26Q8NDV2 337 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 DNAJB14Q8TBM8 379 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 SMG7Q92540 1137 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 FUBP1Q96AE4 644 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 C12orf43Q96C57 262 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 NRBF2Q96F24 287 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 LINGO1Q96FE5 620 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 ASIC4Q96FT7 647 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 SCRN2Q96FV2 425 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 NSMCE2Q96MF7 247 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 ABCG8Q9H221 673 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 MTG2Q9H4K7 406 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 NANOGQ9H9S0 305 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 SEMA4BQ9NPR2 832 aaPredicted RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 MSRAQ9UJ68 235 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 PCTPQ9UKL6 214 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 YBX2Q9Y2T7 364 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 A0A1B0GTL3 188 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 TRIM64BA6NI03 449 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 TTC34A8MYJ7 566 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 PRMT5O14744 637 aaPredicted RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 HPRP00739 348 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ALBP02768 609 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CYP17A1P05093 508 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 JUNBP17275 347 aaPredicted RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ITGB6P18564 788 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 NRIP1P48552 1158 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 DIO3P55073 304 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CDH15P55291 814 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ADARB1P78563 741 aaKnown RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 PTSQ03393 145 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 RAB30Q15771 203 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CHRNA6Q15825 494 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ATP6AP1LQ52LC2 224 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CYBRD1Q53TN4 286 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 SNX20Q7Z614 316 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 SYVN1Q86TM6 617 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 C12orf40Q86WS4 652 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ZFAND4Q86XD8 727 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 GPSM1Q86YR5 675 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 STK40Q8N2I9 435 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 SFRP1Q8N474 314 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ZNF366Q8N895 744 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 PDPRQ8NCN5 879 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 LKAAEAR1Q8TD35 194 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 BPIFB1Q8TDL5 484 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 BIRC7Q96CA5 298 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 PDLIM5Q96HC4 596 aaKnown RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ZFYVE19Q96K21 471 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 KCNA7Q96RP8 456 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 LYSMD1Q96S90 227 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CIPCQ9C0C6 399 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CEP44Q9C0F1 390 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 HEBP1Q9NRV9 189 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 NUDT4Q9NZJ9 180 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 BTRCQ9Y297 605 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 PRSS21Q9Y6M0 314 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ZNF106Q9H2Y7 1883 aaKnown RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CXorf51AA0A1B0GTR3 108 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 FAM149AA5PLN7 773 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 C16orf96A6NNT2 1141 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 EI24O14681 340 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ZNF197O14709 1029 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 SYNCRIPO60506 623 aaKnown RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 POP4O95707 220 aaKnown RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 PCSK2P16519 638 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 NELFEP18615 380 aaKnown RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 POLR2EP19388 210 aaKnown RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 MSH3P20585 1137 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ITGALP20701 1170 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ACRV1P26436 265 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 OXTRP30559 389 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 SPAM1P38567 509 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 TMBIM6P55061 237 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 DHCR24Q15392 516 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 RBBP7Q16576 425 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ZNF829Q3KNS6 432 aaPredicted RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 FAM98BQ52LJ0 330 aaKnown RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 C6orf136Q5SQH8 315 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CERS6Q6ZMG9 384 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 TPRG1Q6ZUI0 275 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 USP45Q70EL2 814 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 VN1R2Q8NFZ6 395 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 OR8J3Q8NGG0 315 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 FRS2Q8WU20 508 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 BORCS5Q969J3 196 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 THAP11Q96EK4 314 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 MAGED4Q96JG8 741 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 MRGPRX3Q96LB0 322 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 MCCC1Q96RQ3 725 aaPredicted RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CHID1Q9BWS9 393 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 APOL5Q9BWW9 433 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 UGT2B28Q9BY64 529 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 PBX4Q9BYU1 374 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CPEB1Q9BZB8 566 aaKnown RBP10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 CLPBQ9H078 707 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 PALMDQ9NP74 551 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 TBC1D23Q9NUY8 699 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 MARK1Q9P0L2 795 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms